RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SLC6A2P23975 617 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 GAS1P54826 345 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 TLE1Q04724 770 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 CHRNEQ04844 493 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 RBBP4Q09028 425 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF141Q15928 474 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 KLHL26Q53HC5 615 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF324BQ6AW86 544 aaPredicted RBP15.62■□□□□ 0.09
HDAC6-235ENST00000495515 SERPINA11Q86U17 422 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 TMEM251Q8N6I4 163 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 FITM2Q8N6M3 262 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 OR4K17Q8NGC6 315 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 TMEM19Q96HH6 336 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 SLC39A3Q9BRY0 314 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 KAT8Q9H7Z6 458 aaKnown RBP15.62■□□□□ 0.09
HDAC6-235ENST00000495515 PTGES2Q9H7Z7 377 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 SUCOQ9UBS9 1254 aaKnown RBP15.62■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPA1Q9UND3 350 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 C15orf41Q9Y2V0 281 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 L3MBTL1Q9Y468 752 aa15.62■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPA5A0A0B4J1W7 369 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 C2orf72A6NCS6 295 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPA7E9PJI5 369 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 CHRM4P08173 479 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 NUDT7P0C024 238 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 NPIPA8P0DM63 369 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 ARAFP10398 606 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 EDN3P14138 238 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 GDF1P27539 372 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 MSX1P28360 303 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 CDK6Q00534 326 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 SLC10A1Q14973 349 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 TOMM20Q15388 145 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 RNFT1Q5M7Z0 435 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 REEP3Q6NUK4 255 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 APOOLQ6UXV4 268 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF605Q86T29 641 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 SLC30A8Q8IWU4 369 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 PEX5LQ8IYB4 626 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 WDSUB1Q8N9V3 476 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 C11orf65Q8NCR3 313 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 BBS10Q8TAM1 723 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 PHOSPHO1Q8TCT1 267 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 DUSP19Q8WTR2 217 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 GNRHR2Q96P88 292 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 TREX2Q9BQ50 279 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-235ENST00000495515 SLX1AQ9BQ83 275 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 SLC38A1Q9H2H9 487 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF703Q9H7S9 590 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-235ENST00000495515 BCL2L10Q9HD36 194 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 NDE1Q9NXR1 346 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 ANGPT4Q9Y264 503 aa15.61■□□□□ 0.09
HDAC6-235ENST00000495515 IGLV3-32A0A0A0MS00 114 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SERINC4A6NH21 518 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 GTPBP1O00178 669 aaKnown RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 UGT2B17O75795 530 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 DBIP07108 87 aaKnown RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ESRRAP11474 423 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 MAGEA5P43359 124 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SCARB2Q14108 478 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SELPLGQ14242 412 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 RABL3Q5HYI8 236 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 PDZK1Q5T2W1 519 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 FNDC7Q5VTL7 733 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 EIF3MQ7L2H7 374 aaKnown RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ATCAYQ86WG3 371 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 KRT73Q86Y46 540 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SIAH3Q8IW03 269 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 HIPK4Q8NE63 616 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 OR10A6Q8NH74 314 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 MAL2Q969L2 176 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 GPR137Q96N19 417 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 GPATCH1Q9BRR8 931 aaKnown RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ZDHHC11Q9H8X9 412 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ARL8BQ9NVJ2 186 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SEC14L3Q9UDX4 400 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 ZNF232Q9UNY5 417 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 SLC35A3Q9Y2D2 325 aa15.6■□□□□ 0.09
HDAC6-235ENST00000495515 AGAP5A6NIR3 686 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 TRAPPC6AO75865 159 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ZIC2O95409 532 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 RFPL3SP0C7P2 107 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 IL7RP16871 459 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 MST1P26927 711 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 GCKP35557 465 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ADH7P40394 386 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 MXRA7P84157 204 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ELOAQ14241 798 aaKnown RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 GANABQ14697 944 aaKnown RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 LARS2Q15031 903 aaKnown RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ZSWIM7Q19AV6 140 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 OR5M10Q6IEU7 315 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 ERICH5Q6P6B1 374 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 OLIG3Q7RTU3 272 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 TRPM8Q7Z2W7 1104 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 NET1Q7Z628 596 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-235ENST00000495515 CMIPQ8IY22 773 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 GHDCQ8N2G8 530 aa15.59■□□□□ 0.09
HDAC6-235ENST00000495515 GATSQ8NAP1 163 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms