RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 FAM110BQ8TC76 370 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 MBD6Q96DN6 1003 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 FAM120BQ96EK7 910 aaKnown RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 DACH2Q96NX9 599 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 MS4A4EQ96PG1 132 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 C1orf50Q9BV19 199 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 TBL1XR1Q9BZK7 514 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PIGMQ9H3S5 423 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 GSX1Q9H4S2 264 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 RNF122Q9H9V4 155 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PPCSQ9HAB8 311 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 C6orf203Q9P0P8 240 aaPredicted RBP10.47□□□□□ -0.73
VTI1A-208ENST00000494728 SH3BP4Q9P0V3 963 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 LGALS13Q9UHV8 139 aa10.47□□□□□ -0.73
VTI1A-208ENST00000494728 PLCE1Q9P212 2302 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 NPIPA5A0A0B4J1W7 369 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ALG1L2C9J202 215 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 NPIPA7E9PJI5 369 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 MSTNO14793 375 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 SCAMP2O15127 329 aaKnown RBP10.46□□□□□ -0.73
VTI1A-208ENST00000494728 SKAP2O75563 359 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-208ENST00000494728 KCNH1O95259 989 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 OPN1LWP04000 364 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 RAF1P04049 648 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 NUDT17P0C025 328 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 NPIPA8P0DM63 369 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 LAMP1P11279 417 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 CD99P14209 185 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 CD53P19397 219 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 IL11P20809 199 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 SHC1P29353 583 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 DEFB113Q30KQ7 82 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 FBXW10Q5XX13 1052 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 KRTCAP2Q8N6L1 136 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 CDRT4Q8N9R6 151 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 POC1BQ8TC44 478 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 TCP10LQ8TDR4 215 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF524Q96C55 264 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ZBED6CLQ96FA7 236 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-208ENST00000494728 SH3YL1Q96HL8 342 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ADGRG7Q96K78 797 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 MARK4Q96L34 752 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 WFIKKN1Q96NZ8 548 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 TRMOQ9BU70 441 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ACBD3Q9H3P7 528 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 TMEM185BQ9H7F4 350 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 KLHL28Q9NXS3 571 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 ZNF175Q9Y473 711 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 TRAF6Q9Y4K3 522 aa10.46□□□□□ -0.73
VTI1A-208ENST00000494728 A0A1W2PRB8 838 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 EIF1AYO14602 144 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 EMC8O43402 210 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 NPHS1O60500 1241 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PEX11AO75192 247 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 TNFRSF21O75509 655 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 HMGN2P05204 90 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 NGFRP08138 427 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 FGF4P08620 206 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 TBXA2RP21731 343 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 LOXP28300 417 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PSMD4P55036 377 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 MANFP55145 182 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 C17orf67Q0P5P2 114 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 LASP1Q14847 261 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PLPPR5Q32ZL2 321 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CXorf67Q86X51 503 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CNPY4Q8N129 248 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 COX18Q8N8Q8 333 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 OR6Y1Q8NGX8 325 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ZFP28Q8NHY6 868 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 AENQ8WTP8 325 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CDS1Q92903 461 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ARSGQ96EG1 525 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PGM2Q96G03 612 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 POM121Q96HA1 1249 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PKNOX2Q96KN3 472 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 RNF145Q96MT1 663 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CXorf36Q9H7Y0 433 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 PTGES2Q9H7Z7 377 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ZNF395Q9H8N7 513 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 SDHAF3Q9NRP4 125 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ACSS1Q9NUB1 689 aaPredicted RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 MED17Q9NVC6 651 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ATP6V1HQ9UI12 483 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 ZDHHC2Q9UIJ5 367 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 MID2Q9UJV3 735 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CLEC4AQ9UMR7 237 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 TMED5Q9Y3A6 229 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 KCNE3Q9Y6H6 103 aa10.45□□□□□ -0.74
VTI1A-208ENST00000494728 SONP18583 2426 aaKnown RBP10.45□□□□□ -0.74
VTI1A-208ENST00000494728 CENPVL1A0A0U1RR11 272 aa10.44□□□□□ -0.74
VTI1A-208ENST00000494728 CTIFO43310 598 aaKnown RBP10.44□□□□□ -0.74
VTI1A-208ENST00000494728 NDUFB5O43674 189 aa10.44□□□□□ -0.74
VTI1A-208ENST00000494728 TYROBPO43914 113 aa10.44□□□□□ -0.74
VTI1A-208ENST00000494728 LYPLA1O75608 230 aaPredicted RBP10.44□□□□□ -0.74
VTI1A-208ENST00000494728 CRHP06850 196 aa10.44□□□□□ -0.74
VTI1A-208ENST00000494728 ZNF17P17021 662 aa10.44□□□□□ -0.74
VTI1A-208ENST00000494728 UGT2B10P36537 528 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms