RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CALHM3Q86XJ0 350 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 KRT73Q86Y46 540 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 GATSQ8NAP1 163 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 SLC39A7Q92504 469 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 KCTD14Q9BQ13 255 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-223ENST00000494123 TUBA8Q9NY65 449 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-223ENST00000494123 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.32□□□□□ -0.28
BRCA1-223ENST00000494123 PPP4R1LQ9P1A2 415 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 TMEM181Q9P2C4 612 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 ABCD2Q9UBJ2 740 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 DTNAQ9Y4J8 743 aa13.32□□□□□ -0.28
BRCA1-223ENST00000494123 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.32□□□□□ -0.28
BRCA1-223ENST00000494123 A0A1W2PQD3 144 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 NPIPB9F8W1W9 429 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 DNAJA2O60884 412 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ATP5HO75947 161 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PGM3O95394 542 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ANGPTL1O95841 491 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 DBIP07108 87 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 IL7RP16871 459 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 AQP1P29972 269 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PCGF2P35227 344 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 CPOXP36551 454 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PTGDSP41222 190 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 RNF144AP50876 292 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 GZMMP51124 257 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 BNIP1Q12981 228 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF141Q15928 474 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 BNC2Q6ZN30 1099 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 HMGN2P46Q86SG4 172 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PHOSPHO1Q8TCT1 267 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 OIT3Q8WWZ8 545 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF607Q96SK3 696 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 CDRT15Q96T59 188 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 C1orf21Q9H246 121 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PROK2Q9HC23 129 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 HHATLQ9HCP6 504 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 BCL2L10Q9HD36 194 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 SUCOQ9UBS9 1254 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ANAPC2Q9UJX6 822 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 NINQ8N4C6 2090 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 DSPPQ9NZW4 1301 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ELOVL7A1L3X0 281 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PINLYPA6NC86 204 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 AGAP5A6NIR3 686 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ACOT7O00154 380 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 GTPBP1O00178 669 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 GNB5O14775 395 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 GSTA4O15217 222 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PDE9AO76083 593 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ENDOUP21128 410 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ELAVL4P26378 380 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 RFC3P40938 356 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 GSK3BP49841 420 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 RASSF2P50749 326 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 PMP22Q01453 160 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 KLHL26Q53HC5 615 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 SAMD4BQ5PRF9 694 aaKnown RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 FAM180AQ6UWF9 173 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 APOOLQ6UXV4 268 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 CCDC121Q6ZUS5 278 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 MISPQ8IVT2 679 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 MICU2Q8IYU8 434 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 RNF148Q8N7C7 305 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 Q8NA96 180 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZFP62Q8NB50 900 aaPredicted RBP13.31□□□□□ -0.28
BRCA1-223ENST00000494123 TNIP2Q8NFZ5 429 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 OR1J4Q8NGS1 313 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 OR52P1PQ8NH57 321 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 DUSP19Q8WTR2 217 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 RNF138Q8WVD3 245 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 WDR60Q8WVS4 1066 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZG16BQ96DA0 208 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 TMEM41AQ96HV5 264 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 SPATA5L1Q9BVQ7 753 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZFP64Q9NPA5 681 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 TAS2R1Q9NYW7 299 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 B4GALT7Q9UBV7 327 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 KCNE5Q9UJ90 142 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF232Q9UNY5 417 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 USP22Q9UPT9 525 aa13.31□□□□□ -0.28
BRCA1-223ENST00000494123 CENPVL1A0A0U1RR11 272 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 SERINC4A6NH21 518 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 GYG2O15488 501 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 TRIM3O75382 744 aaPredicted RBP13.3□□□□□ -0.28
BRCA1-223ENST00000494123 SERPINB7O75635 380 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 ETS2P15036 469 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF24P17028 368 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 GAS1P54826 345 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 C17orf67Q0P5P2 114 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 VEZF1Q14119 521 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 LARS2Q15031 903 aaKnown RBP13.3□□□□□ -0.28
BRCA1-223ENST00000494123 MAPK14Q16539 360 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 DNAL1Q4LDG9 190 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 LIN52Q52LA3 116 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 ZNF311Q5JNZ3 666 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 AP1ARQ63HQ0 302 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 OR5M10Q6IEU7 315 aa13.3□□□□□ -0.28
BRCA1-223ENST00000494123 EIF3MQ7L2H7 374 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms