RNA–Protein interactions for RNA: ENST00000494069.1

LRCH3-219, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 5

Gene LRCH3, Length 783 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-219ENST00000494069 ANKHD1Q8IWZ3 2542 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 IGLV3-32A0A0A0MS00 114 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 A0A1W2PNV4 684 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 TUBAL3A6NHL2 446 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 A6NNC1 897 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 A8MXE2 369 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 TMEM114B3SHH9 223 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ALG1L2C9J202 215 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CTIFO43310 598 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 OIP5O43482 229 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 AQP8O94778 261 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 HMGN2P05204 90 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ALOX5P09917 674 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 G6PDP11413 515 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 PEPDP12955 493 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SERPINB5P36952 375 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 KIR2DL2P43627 348 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ASMTP46597 345 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SLC6A8P48029 635 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ART1P52961 327 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 PSMD4P55036 377 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 DIO3P55073 304 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SIRPAP78324 504 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 FAM27E3Q08E93 113 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 C17orf67Q0P5P2 114 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 DAZAP2Q15038 168 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 POU4F3Q15319 338 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CD226Q15762 336 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CHI3L2Q15782 390 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 PDCD2Q16342 344 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 TMEM44Q2T9K0 475 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 KRT71Q3SY84 523 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ATP6AP1LQ52LC2 224 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 VWA1Q6PCB0 445 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 P4HA3Q7Z4N8 544 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 R3HCC1LQ7Z5L2 792 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 BTLAQ7Z6A9 289 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CDC20BQ86Y33 519 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 NUDCD3Q8IVD9 361 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CLEC4FQ8N1N0 589 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 MREGQ8N565 214 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 ZNF781Q8N8C0 355 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 OR5AK3PQ8NH89 298 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 FNDC9Q8TBE3 224 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CDS1Q92903 461 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 TUBGCP3Q96CW5 907 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 COQ8BQ96D53 544 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 STARD4Q96DR4 205 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 MTERF3Q96E29 417 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SH3YL1Q96HL8 342 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 MS4A4EQ96PG1 132 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 TM9SF2Q99805 663 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SFXN3Q9BWM7 321 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 PINK1Q9BXM7 581 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 OPN3Q9H1Y3 402 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CLEC4MQ9H2X3 399 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 C3orf14Q9HBI5 128 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 CCM2LQ9NUG4 571 aaPredicted RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 MRTO4Q9UKD2 239 aaKnown RBP7.69□□□□□ -1.18
LRCH3-219ENST00000494069 VDAC3Q9Y277 283 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 PLEKHA6Q9Y2H5 1048 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 SNX8Q9Y5X2 465 aa7.69□□□□□ -1.18
LRCH3-219ENST00000494069 NUP214P35658 2090 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 A0A1W2PPR1 153 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 SLC22A20A6NK97 555 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 TTC36A6NLP5 189 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 RGS16O15492 202 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 NDUFB5O43674 189 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 ZNF500O60304 480 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 SMNDC1O75940 238 aaKnown RBP eCLIP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 SERPINE1P05121 402 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 EPXP11678 715 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 IL11P20809 199 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 TBXA2RP21731 343 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 HPCAL1P37235 193 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CPA2P48052 419 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CCT3P49368 545 aaKnown RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 PRIM2P49643 509 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CLK3P49761 638 aaKnown RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CASP9P55211 416 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 RPS26P62854 115 aaKnown RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 GANABQ14697 944 aaKnown RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 MLC1Q15049 377 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 PON3Q15166 354 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 NDUFAF6Q330K2 333 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 VPS26BQ4G0F5 336 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CPTPQ5TA50 214 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 ZNF474Q6S9Z5 364 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 LRIG3Q6UXM1 1119 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 SPNS3Q6ZMD2 512 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CHMP1BQ7LBR1 199 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 OLIG3Q7RTU3 272 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 GGNQ86UU5 652 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 RETREG3Q86VR2 466 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 LSRQ86X29 649 aaPredicted RBP7.68□□□□□ -1.18
LRCH3-219ENST00000494069 KIF18BQ86Y91 864 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 RIMKLAQ8IXN7 391 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 CLECL1Q8IZS7 167 aa7.68□□□□□ -1.18
LRCH3-219ENST00000494069 MEIOBQ8N635 442 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms