RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 C12orf73Q69YU5 71 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PLAG1Q6DJT9 500 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PARGQ86W56 976 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TCEANCQ8N8B7 351 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 OR5T3Q8NGG3 340 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 ZDHHC1Q8WTX9 485 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TXNDC15Q96J42 360 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SLC6A18Q96N87 628 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 NEDD4LQ96PU5 975 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 PRR14Q9BWN1 585 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PHF7Q9BWX1 381 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SLC2A4RGQ9NR83 387 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PTGFRNQ9P2B2 879 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 GPR55Q9Y2T6 319 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 CHST2Q9Y4C5 530 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SPACA6W5XKT8 324 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 GON4LQ3T8J9 2241 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TFECO14948 347 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 LDB3O75112 727 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 AGR2O95994 175 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 PTTG1O95997 202 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SOX18P35713 384 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 NUDT1P36639 197 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 RPS19P39019 145 aaKnown RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 VSX2P58304 361 aaPredicted RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 TAS2R41P59536 307 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 SNRPGP62308 76 aaKnown RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 NXNL2Q5VZ03 156 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 CD300LDQ6UXZ3 194 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 FRRS1Q6ZNA5 592 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 OR52P1PQ8NH57 321 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 TPSD1Q9BZJ3 242 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 NXF2Q9GZY0 626 aaKnown RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 HHATLQ9HCP6 504 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 CNOT2Q9NZN8 540 aaKnown RBP12.84□□□□□ -0.35
VCP-207ENST00000493886 MKLN1Q9UL63 735 aa12.84□□□□□ -0.35
VCP-207ENST00000493886 B4DGG1 531 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 CCNKO75909 580 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 PRKAR1BP31321 381 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 TNFSF8P32971 234 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 SHC2P98077 582 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 ALDH6A1Q02252 535 aaKnown RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 NDUFA9Q16795 377 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 TRMT12Q53H54 448 aaKnown RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 ZNF628Q5EBL2 1059 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 LIPKQ5VXJ0 399 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 ARMC6Q6NXE6 501 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 CASP12Q6UXS9 341 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 NRARPQ7Z6K4 114 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 LAX1Q8IWV1 398 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 TMEM52Q8NDY8 209 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 CCDC3Q9BQI4 270 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 BARHL1Q9BZE3 327 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 B8ZZF3 427 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 CYR61O00622 381 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 FGF17O60258 216 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 GALR3O60755 368 aaPredicted RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 CSO75390 466 aaKnown RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 SLC15A1P46059 708 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 DUSP5Q16690 384 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 FAM205BPQ63HN1 556 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 C1orf94Q6P1W5 598 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 FAM122CQ6P4D5 195 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 UBE2J2Q8N2K1 259 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 DOK4Q8TEW6 326 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 DMRTB1Q96MA1 342 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 SLC30A2Q9BRI3 323 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 LRRC61Q9BV99 259 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 TRIM45Q9H8W5 580 aaPredicted RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 LMAN1LQ9HAT1 526 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 IL21RQ9HBE5 538 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 SMURF1Q9HCE7 757 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 STARD5Q9NSY2 213 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 TVP23BQ9NYZ1 205 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 MKL2Q9ULH7 1088 aa12.83□□□□□ -0.36
VCP-207ENST00000493886 C19orf53Q9UNZ5 99 aaPredicted RBP12.83□□□□□ -0.36
VCP-207ENST00000493886 CHURC1-FNTBB4DL54 471 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 HCRTR1O43613 425 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ACP2P11117 423 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 ST6GAL1P15907 406 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 AVPR1BP47901 424 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 GPR85P60893 370 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 TDGQ13569 410 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 NR4A3Q92570 626 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CRELD1Q96HD1 420 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 GPA33Q99795 319 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 FAM60AQ9NP50 221 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 TIGARQ9NQ88 270 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 KLHL28Q9NXS3 571 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 POMT2Q9UKY4 750 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 YARS2Q9Y2Z4 477 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 WDR45Q9Y484 360 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 A0A087WUU8 490 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 IGHV1OR15-9A0A0B4J2B8 117 aa12.82□□□□□ -0.36
VCP-207ENST00000493886 CPSF4LA6NMK7 179 aaKnown RBP12.82□□□□□ -0.36
VCP-207ENST00000493886 APOA1P02647 267 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms