RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 KCNN2Q9H2S1 579 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 IL21RQ9HBE5 538 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 MOV10Q9HCE1 1003 aaKnown RBP8.98□□□□□ -0.97
NPHP3-209ENST00000493732 ADAP2Q9NPF8 381 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 HRASLS2Q9NWW9 162 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 TNFRSF10DQ9UBN6 386 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 ADAM30Q9UKF2 790 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 MMP17Q9ULZ9 603 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 SF3B6Q9Y3B4 125 aaKnown RBP8.98□□□□□ -0.97
NPHP3-209ENST00000493732 TICRRQ7Z2Z1 1910 aa8.98□□□□□ -0.97
NPHP3-209ENST00000493732 TRBV23OR9-2A0A075B6M9 112 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 EPOPA6NHQ4 379 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 SLC22A31A6NKX4 558 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CYR61O00622 381 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 DYRK3O43781 588 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 RBM34P42696 430 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 GPR4P46093 362 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ZNF136P52737 540 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 UBE2IP63279 158 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 LSM11P83369 360 aaKnown RBP eCLIP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR1Q1Q15612 314 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TRAM1Q15629 374 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 PRICKLE4Q2TBC4 344 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TRMT12Q53H54 448 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 PDZK1Q5T2W1 519 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 C22orf42Q6IC83 251 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 GDPD3Q7L5L3 318 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CXXC5Q7LFL8 322 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 GRAMD2AQ8IUY3 354 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR4N5Q8IXE1 308 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 LNX2Q8N448 690 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 FAM181AQ8N9Y4 354 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR4Q3Q8NH05 313 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TMEM255BQ8WV15 326 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 LRFN5Q96NI6 719 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 PRR14Q9BWN1 585 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 UBQLN3Q9H347 655 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 SIDT1Q9NXL6 827 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MRPS33Q9Y291 106 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 GPR52Q9Y2T5 361 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MED31Q9Y3C7 131 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 LOC105369274A0A096LPK9 316 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 LOC102723532A0A0G2JNH3 316 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TCRBV21S2A2A0A5A6 115 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 FABP12A6NFH5 140 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 BRINP1O60477 761 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 NKX2-2O95096 273 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 BMP8BP34820 402 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MAP3K8P41279 467 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 PSMD4P55036 377 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CTBP2P56545 445 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MAP4K2Q12851 820 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 HNRNPA0Q13151 305 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 GAS6Q14393 721 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 AMZ1Q400G9 498 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MRPL2Q5T653 305 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR2G6Q5TZ20 316 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 DESI1Q6ICB0 168 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ZNF544Q6NX49 715 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 FAM131AQ6UXB0 335 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MEPCEQ7L2J0 689 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 BMP8AQ7Z5Y6 402 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR4N4Q8N0Y3 316 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CA13Q8N1Q1 262 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ACBD7Q8N6N7 88 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ZNF485Q8NCK3 441 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 FANK1Q8TC84 345 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ASB15Q8WXK1 588 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ACOT12Q8WYK0 555 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TM9SF4Q92544 642 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 HOXB13Q92826 284 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CTHRC1Q96CG8 243 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 SAMD8Q96LT4 415 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 SECISBP2Q96T21 854 aaKnown RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TRIM2Q9C040 744 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 OR52D1Q9H346 318 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 TPK1Q9H3S4 243 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 C6orf106Q9H6K1 298 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 POLMQ9NP87 494 aaPredicted RBP8.97□□□□□ -0.97
NPHP3-209ENST00000493732 ERVK13-1Q9NX77 482 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 MAT2BQ9NZL9 334 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CBLCQ9ULV8 474 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CA5BQ9Y2D0 317 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 CARD8Q9Y2G2 431 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 V9GYH0 126 aa8.97□□□□□ -0.97
NPHP3-209ENST00000493732 A0A1W2PQL4 384 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 HTR3EA5X5Y0 456 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 OR5K3A6NET4 321 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 WWP2O00308 870 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 CASKO14936 926 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 PLD2O14939 933 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SEC14L5O43304 696 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 FGF17O60258 216 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 OR10H2O60403 315 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SRPX2O60687 465 aaPredicted RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 HCN1O60741 890 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 SNRNP200O75643 2136 aaKnown RBP8.96□□□□□ -0.97
NPHP3-209ENST00000493732 KCNK2O95069 426 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 IGLV3-19P01714 112 aa8.96□□□□□ -0.97
NPHP3-209ENST00000493732 THY1P04216 161 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms