RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 OR56B4Q8NH76 319 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 TMEM163Q8TC26 289 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NUDT8Q8WV74 236 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 EXTL1Q92935 676 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ARL11Q969Q4 196 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 HIST1H2BAQ96A08 127 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 RRNAD1Q96FB5 475 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 CPPED1Q9BRF8 314 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 BRINP2Q9C0B6 783 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 NXF3Q9H4D5 531 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 FBXO44Q9H4M3 255 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 GPN1Q9HCN4 374 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 DCAF13Q9NV06 445 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 ZDHHC8Q9ULC8 765 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 SAMD4AQ9UPU9 718 aaKnown RBP6.45□□□□□ -1.38
VPS13B-205ENST00000493587 BACE2Q9Y5Z0 518 aa6.45□□□□□ -1.38
VPS13B-205ENST00000493587 A0A087X1B8 175 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 A0A0G2JN53 185 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ASPDHA6ND91 283 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 A6NNC1 897 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ERI2A8K979 691 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ARPC1BO15143 372 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 GMFGO60234 142 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 RGS9O75916 674 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 FGF19O95750 216 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 LGI1O95970 557 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 MT-ND4LP03901 98 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 GKN3PP0CG01 181 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PKMP14618 531 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ABOP16442 354 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PPP2R1BP30154 601 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 TLX1P31314 330 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ARL4AP40617 200 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 GLP1RP43220 463 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ZP1P60852 638 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 VMACQ2NL98 169 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 NKAPLQ5M9Q1 402 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 UBXN11Q5T124 520 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 GLT8D1Q68CQ7 371 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ULK3Q6PHR2 472 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 UQCC3Q6UW78 93 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 METTL7BQ6UX53 244 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PLPPR4Q7Z2D5 763 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SIAH3Q8IW03 269 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 STK40Q8N2I9 435 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ACBD4Q8NC06 268 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 TNFAIP8L1Q8WVP5 186 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 OIT3Q8WWZ8 545 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SIGLEC11Q96RL6 698 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 FEVQ99581 238 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 CDCA3Q99618 268 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 RAD9AQ99638 391 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 MRPS30Q9NP92 439 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PARD6AQ9NPB6 346 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 HELZP42694 1942 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 MOXD2PA6NHM9 499 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 COLCA2A8K830 154 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SUPT3HB4E1H0 165 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 M0R143 59 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 PPP1R2P9O14990 202 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 CREBL2O60519 120 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SNAPC5O75971 98 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SCAF4O95104 1147 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SLC25A27O95847 323 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SNAI1O95863 264 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 F10P00742 488 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 HLA-DQB1P01920 261 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 UBBP0CG47 229 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 C1GALT1C1LP0DN25 315 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 NR2F6P10588 404 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 NCF1P14598 390 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 CD46P15529 392 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 EPB42P16452 691 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 CTSOP43234 321 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 AFF3P51826 1226 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 MAXP61244 160 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 STXBP1P61764 594 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 RPS27AP62979 156 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 UBA52P62987 128 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 TDGQ13569 410 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SV2CQ496J9 727 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ATAT1Q5SQI0 421 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 NHLRC1Q6VVB1 395 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF783Q6ZMS7 281 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ZNF548Q8NEK5 533 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 HASPINQ8TF76 798 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 SLC25A28Q96A46 364 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 RTP4Q96DX8 246 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ABHD16BQ9H3Z7 469 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 GSTO2Q9H4Y5 243 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 AIG1Q9NVV5 245 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 C1orf109Q9NX04 203 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 H2AFY2Q9P0M6 372 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 ANAPC1Q9H1A4 1944 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 A0A1W2PPH5 198 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 KDM4EB2RXH2 506 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 IMPA2O14732 288 aa6.44□□□□□ -1.38
VPS13B-205ENST00000493587 CSO75390 466 aaKnown RBP6.44□□□□□ -1.38
VPS13B-205ENST00000493587 DRD2P14416 443 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms