RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 CRTC1Q6UUV9 634 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 LILRA3Q8N6C8 439 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR5D16Q8NGK9 328 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR13C5Q8NGS8 318 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR4Q3Q8NH05 313 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 XAGE5Q8WWM1 108 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RFKQ969G6 155 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR51I1Q9H343 314 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 NFKBIL1Q9UBC1 381 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 PRKAG2Q9UGJ0 569 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 SH2B3Q9UQQ2 575 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 TDRD15B5MCY1 1934 aaKnown RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF254O75437 659 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OAZ2O95190 189 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 IGHA1P01876 353 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 APOC1P02654 83 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RLN2P04090 185 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RAB3BP20337 219 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 GDI2P50395 445 aaKnown RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 CCR9P51686 369 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 S100A12P80511 92 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 PTSQ03393 145 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 GK2Q14410 553 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 CTXN3Q4LDR2 81 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF660Q6AZW8 331 aaPredicted RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 GSG1LQ6UXU4 331 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RPTNQ6XPR3 784 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 C6orf120Q7Z4R8 191 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 MCATQ8IVS2 390 aaKnown RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR5T2Q8NGG2 359 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR5M9Q8NGP3 310 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 OR5W2Q8NH69 310 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 BBS10Q8TAM1 723 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 GNPDA2Q8TDQ7 276 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 TIMP4Q99727 224 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 SEMA4CQ9C0C4 833 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 ELAC1Q9H777 363 aaKnown RBP10.94□□□□□ -0.66
HDAC4-210ENST00000493582 HRASLSQ9HDD0 168 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 A4GALTQ9NPC4 353 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 RNF181Q9P0P0 153 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 PADI3Q9ULW8 664 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 BACE2Q9Y5Z0 518 aa10.94□□□□□ -0.66
HDAC4-210ENST00000493582 MPTX1A8MV57 137 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 FRS3O43559 492 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ATG12O94817 140 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 HPP00738 406 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ATF1P18846 271 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 MST1P26927 711 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 CALCRP30988 508 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 AHRP35869 848 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 MANFP55145 182 aaKnown RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 STXBP1P61764 594 aaKnown RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 PITPNAQ00169 270 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 LGALS3BPQ08380 585 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 FAM74A1Q5RGS3 127 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 B3GNTL1Q67FW5 361 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 CPOQ8IVL8 374 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 HDDC3Q8N4P3 179 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 TBC1D19Q8N5T2 526 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 OR52B4Q8NGK2 314 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SMAP2Q8WU79 429 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SORCS1Q8WY21 1168 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ZNF607Q96SK3 696 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ADAM2Q99965 735 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SLC39A1Q9NY26 324 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 CTSFQ9UBX1 484 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 TRPV2Q9Y5S1 764 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 EPPINO95925 133 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 GIPP09681 153 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 MPC1LP0DKB6 136 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 BUD31P41223 144 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 OR1G1P47890 313 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 PREPP48147 710 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 RAP2BP61225 183 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ELP2Q6IA86 826 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 APOOLQ6UXV4 268 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 APCDD1Q8J025 514 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 EIF4E3Q8N5X7 224 aaKnown RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 C17orf47Q8NEP4 570 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ABHD4Q8TB40 342 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 HAVCR2Q8TDQ0 301 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 NSMAFQ92636 917 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ALG8Q9BVK2 526 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 MED20Q9H944 212 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 NOX3Q9HBY0 568 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 H2AFY2Q9P0M6 372 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 KLK11Q9UBX7 282 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 PLCL2Q9UPR0 1127 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 EXOGQ9Y2C4 368 aaKnown RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 OR2M5A3KFT3 312 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SURF4O15260 269 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 ATP1B2P14415 290 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 PPP3CBP16298 524 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 GSTM3P21266 225 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 RECQLP46063 649 aaPredicted RBP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SHC2P98077 582 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 DYRK1AQ13627 763 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SLBPQ14493 270 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC4-210ENST00000493582 SLCO4C1Q6ZQN7 724 aa10.93□□□□□ -0.66
HDAC4-210ENST00000493582 LINGO2Q7L985 606 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms