RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 KRT73Q86Y46 540 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZNF619Q8N2I2 560 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZNF614Q8N883 585 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TMEM178AQ8NBL3 297 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 FAM13CQ8NE31 585 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 FAM110BQ8TC76 370 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 SLC26A7Q8TE54 656 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 LRGUKQ96M69 825 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 COL21A1Q96P44 957 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZNF607Q96SK3 696 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TREX2Q9BQ50 279 aaPredicted RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 ZNF350Q9GZX5 532 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 SLC38A1Q9H2H9 487 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 RUBCNLQ9H714 662 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 TRIM45Q9H8W5 580 aaPredicted RBP12.32□□□□□ -0.44
MSH6-208ENST00000493177 POLE3Q9NRF9 147 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 LRFN1Q9P244 771 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 SLC7A8Q9UHI5 535 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 MYO18BQ8IUG5 2567 aa12.32□□□□□ -0.44
MSH6-208ENST00000493177 CFAP73A6NFT4 308 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 ARPC2O15144 300 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 TSPAN2O60636 221 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 SEMA7AO75326 666 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 OR6B1O95007 311 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 UTS2O95399 124 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 FBXO45P0C2W1 286 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 CYP4B1P13584 511 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 HPGDP15428 266 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 NAGAP17050 411 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 DCTP40126 519 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 FBXW4P57775 412 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 SRSF1Q07955 248 aaKnown RBP eCLIP12.31□□□□□ -0.44
MSH6-208ENST00000493177 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.31□□□□□ -0.44
MSH6-208ENST00000493177 C1orf146Q5VVC0 180 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 PRAMEF8Q5VWM4 474 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 PRAMEF7Q5VXH5 474 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 GFRALQ6UXV0 394 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 CYP2R1Q6VVX0 501 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 PATL1Q86TB9 770 aaKnown RBP12.31□□□□□ -0.44
MSH6-208ENST00000493177 DHFR2Q86XF0 187 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 PEX5LQ8IYB4 626 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 SPPL2AQ8TCT8 520 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 UTP4Q969X6 686 aaKnown RBP12.31□□□□□ -0.44
MSH6-208ENST00000493177 TMCO6Q96DC7 493 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 ASB9Q96DX5 294 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 SPACA9Q96E40 222 aaPredicted RBP12.31□□□□□ -0.44
MSH6-208ENST00000493177 NSMCE2Q96MF7 247 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 TRIM15Q9C019 465 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 QRSL1Q9H0R6 528 aaKnown RBP12.31□□□□□ -0.44
MSH6-208ENST00000493177 MUC13Q9H3R2 512 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 MTHFD2LQ9H903 347 aaPredicted RBP12.31□□□□□ -0.44
MSH6-208ENST00000493177 BCL2L10Q9HD36 194 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 HPF1Q9NWY4 346 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 OSGIN2Q9Y236 505 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 SLC5A6Q9Y289 635 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 ZGRF1Q86YA3 2104 aa12.31□□□□□ -0.44
MSH6-208ENST00000493177 CNTRLQ7Z7A1 2325 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 CLEC18AA5D8T8 446 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 OR6C70A6NIJ9 312 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 M0QX08 132 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 TP53I11O14683 189 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 KIAA0513O60268 411 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 ABCB7O75027 752 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 ICOSLGO75144 302 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 UGT2B11O75310 529 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SERPINB7O75635 380 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SERPINA1P01009 418 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 IFNA14P01570 189 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 OPN1SWP03999 348 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 KDELR2P33947 212 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 CD96P40200 585 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 CYB561P49447 251 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 RNF144AP50876 292 aaPredicted RBP12.3□□□□□ -0.44
MSH6-208ENST00000493177 PER3P56645 1201 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 RPP38P78345 283 aaKnown RBP12.3□□□□□ -0.44
MSH6-208ENST00000493177 MS4A2Q01362 244 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 PMP22Q01453 160 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 RBPJQ06330 500 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 TRAP1Q12931 704 aaKnown RBP12.3□□□□□ -0.44
MSH6-208ENST00000493177 FLOT2Q14254 428 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 GRAMD1BQ3KR37 738 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 DESI1Q6ICB0 168 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SPINK14Q6IE38 97 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 LYPD8Q6UX82 237 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 CLEC18BQ6UXF7 455 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 NUP54Q7Z3B4 507 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SPPL2CQ8IUH8 684 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 ARMC8Q8IUR7 673 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 DND1Q8IYX4 353 aaKnown RBP12.3□□□□□ -0.44
MSH6-208ENST00000493177 ARMC10Q8N2F6 343 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 ZNF527Q8NB42 609 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 CLEC18CQ8NCF0 446 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 OR52P1PQ8NH57 321 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 NR4A3Q92570 626 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SIGLEC12Q96PQ1 595 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 SPATA5L1Q9BVQ7 753 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 HOXD1Q9GZZ0 328 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 FLRT3Q9NZU0 649 aa12.3□□□□□ -0.44
MSH6-208ENST00000493177 ACTR3BQ9P1U1 418 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms