RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	CD5L	O43866	347 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	GPRIN2	O60269	458 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	TP53	P04637	393 aa	Predicted RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	THBS1	P07996	1170 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	HMOX2	P30519	316 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	PHB	P35232	272 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	IDUA	P35475	653 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FOXA1	P55317	472 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FAP	Q12884	760 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	TAB1	Q15750	504 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	PGGHG	Q32M88	737 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	NCMAP	Q5T1S8	102 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FAM71E1	Q6IPT2	247 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FIGNL1	Q6PIW4	674 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	SEZ6L2	Q6UXD5	910 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	DNM1P46	Q6ZS02	220 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	NUFIP2	Q7Z417	695 aa	Known RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZAR1	Q86SH2	424 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	WDR75	Q8IWA0	830 aa	Known RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	KBTBD8	Q8NFY9	601 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	OR2V1	Q8NHB1	315 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	POC1B	Q8TC44	478 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	SMAP2	Q8WU79	429 aa	Predicted RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FBXW5	Q969U6	566 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	TRMT61A	Q96FX7	289 aa	Known RBP	12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	RNF145	Q96MT1	663 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FUT8	Q9BYC5	575 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161	FBXO34	Q9NWN3	711 aa		12.2	□□□□□ -0.46
SAMM50-204	ENST00000493161		A0A1W2PRB8	838 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	POC1B-GALNT4	F8VUJ3	575 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	SYNGR4	O95473	234 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	CD8A	P01732	235 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	TUBB	P07437	444 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZNF17	P17021	662 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	PTN	P21246	168 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	SERPINB9	P50453	376 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	RAC1	P63000	192 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	SLC18A2	Q05940	514 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZNF763	Q0D2J5	394 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZNHIT3	Q15649	155 aa	Predicted RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	PLPPR5	Q32ZL2	321 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	HBM	Q6B0K9	141 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	PODNL1	Q6PEZ8	512 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZNF551	Q7Z340	670 aa	Predicted RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	GABRG1	Q8N1C3	465 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	FBXO30	Q8TB52	745 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ABHD3	Q8WU67	409 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	OSTF1	Q92882	214 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	GTPBP3	Q969Y2	492 aa	Known RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZBED6CL	Q96FA7	236 aa	Predicted RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	TACO1	Q9BSH4	297 aa	Known RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	SRXN1	Q9BYN0	137 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	OR10A4	Q9H209	315 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	CDC42EP4	Q9H3Q1	356 aa	Known RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	MED17	Q9NVC6	651 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	SIRT5	Q9NXA8	310 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	TAS2R7	Q9NYW3	318 aa		12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	MRTO4	Q9UKD2	239 aa	Known RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	POLR3H	Q9Y535	204 aa	Predicted RBP	12.19	□□□□□ -0.46
SAMM50-204	ENST00000493161	ABCA1	O95477	2261 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	DPRX	A6NFQ7	191 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	UBFD1	O14562	309 aa	Known RBP	12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	NDUFB5	O43674	189 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	TLX2	O43763	284 aa	Predicted RBP	12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	EFNA2	O43921	213 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	RAMP1	O60894	148 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	OXSR1	O95747	527 aa	Predicted RBP	12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	CD3E	P07766	207 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	IMPDH1	P20839	514 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	MAP3K8	P41279	467 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	BSPH1	Q075Z2	132 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	ETFDH	Q16134	617 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	ZNF672	Q499Z4	452 aa	Predicted RBP	12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	SPDYA	Q5MJ70	313 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	CPTP	Q5TA50	214 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	ANKRD26P1	Q6NSI1	321 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	TFAP2E	Q6VUC0	442 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	STK32C	Q86UX6	486 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	TUSC5	Q8IXB3	177 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	STEAP2	Q8NFT2	490 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	GPR151	Q8TDV0	419 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	SH3YL1	Q96HL8	342 aa	Predicted RBP	12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	EGLN2	Q96KS0	407 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	MYNN	Q9NPC7	610 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	MIEF1	Q9NQG6	463 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	GLRX2	Q9NS18	164 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161	GRID1	Q9ULK0	1009 aa		12.18	□□□□□ -0.46
SAMM50-204	ENST00000493161		A0A087WZY1	265 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161		A0A1W2PP18	115 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	C7orf72	A4D263	438 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	ALG1L2	C9J202	215 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	PHF1	O43189	567 aa	Predicted RBP	12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	SLITRK5	O94991	958 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	KCNH1	O95259	989 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	ADA	P00813	363 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	IFNA2	P01563	188 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	ACP2	P11117	423 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	ADH6	P28332	368 aa		12.17	□□□□□ -0.46
SAMM50-204	ENST00000493161	NTS	P30990	170 aa		12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms