RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 SYNDIG1LA6NDD5 238 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF99A8MXY4 864 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 NPIPA7E9PJI5 369 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 TRMUO75648 421 aaKnown RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 SOX14O95416 240 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 THY1P04216 161 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 NPIPA8P0DM63 369 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 CT45A8P0DMV1 189 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 CT45A9P0DMV2 189 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 OMPP47874 163 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 CCL7P80098 99 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF141Q15928 474 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 CT45A2Q5DJT8 189 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 ZC3H14Q6PJT7 736 aaKnown RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 CASP12Q6UXS9 341 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 NPSR1Q6W5P4 371 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 MBOAT2Q6ZWT7 520 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 AHSA2Q719I0 299 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 PRICKLE2Q7Z3G6 844 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 ZAR1Q86SH2 424 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 NKAIN4Q8IVV8 208 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM151BQ8IW70 566 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 GALNT15Q8N3T1 639 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 RCBTB1Q8NDN9 531 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 OR4N2Q8NGD1 307 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 PTPMT1Q8WUK0 201 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 FAR1Q8WVX9 515 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 RORBQ92753 470 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 SENP5Q96HI0 755 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 Q96MT0 163 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 COPS4Q9BT78 406 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 KRCC1Q9NPI7 259 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 FSCN3Q9NQT6 498 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 ATXN7L1Q9ULK2 861 aaPredicted RBP13□□□□□ -0.33
PTPN7-216ENST00000492977 CBLCQ9ULV8 474 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 SLC7A7Q9UM01 511 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 DTX4Q9Y2E6 619 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 NTNG1Q9Y2I2 539 aa13□□□□□ -0.33
PTPN7-216ENST00000492977 TECTAO75443 2155 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 A0A1W2PQM1 296 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 NPIPB9F8W1W9 429 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 NOL3O60936 208 aaKnown RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 CER1O95813 267 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 MT-ND2P03891 347 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 CLPSP04118 112 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 RPLP0P05388 317 aaKnown RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 STAT5AP42229 794 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 GIPRP48546 466 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 LSM11P83369 360 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 CDK5Q00535 292 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 RHAGQ02094 409 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 OR1Q1Q15612 314 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 PDZK1Q5T2W1 519 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 MFSD4BQ5TF39 518 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 PRAMEF17Q5VTA0 474 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 RASSF6Q6ZTQ3 369 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 TMPRSS9Q7Z410 1059 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 RNF113BQ8IZP6 322 aaKnown RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 EID2Q8N6I1 236 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 OR8J1Q8NGP2 316 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 GGHQ92820 318 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 C12orf43Q96C57 262 aaKnown RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 SLC46A1Q96NT5 459 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 GPA33Q99795 319 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF559Q9BR84 538 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 LRRN3Q9H3W5 708 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 MKKSQ9NPJ1 570 aaPredicted RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 C11orf16Q9NQ32 467 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 PNO1Q9NRX1 252 aaKnown RBP12.99□□□□□ -0.33
PTPN7-216ENST00000492977 CFL2Q9Y281 166 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 OR10H1Q9Y4A9 318 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 ADAMTS20P59510 1910 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 NUP210LQ5VU65 1888 aa12.99□□□□□ -0.33
PTPN7-216ENST00000492977 TCRBV16S1A1N1A0A5B0 115 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 EFCAB10A6NFE3 127 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 INMTO95050 263 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 CDK1P06493 297 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 IGFBP1P08833 259 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 GKN3PP0CG01 181 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 FPR3P25089 353 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ACVR2AP27037 513 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 HTR2AP28223 471 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 RFX3P48380 749 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SMSP52788 366 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ATP12AP54707 1039 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SLC37A1P57057 533 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ELAVL1Q15717 326 aaKnown RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 CLPPQ16740 277 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 MINDY4Q4G0A6 757 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 TMEM201Q5SNT2 666 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 SYT6Q5T7P8 510 aaPredicted RBP12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ARHGAP40Q5TG30 622 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 RHBDD2Q6NTF9 364 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 ZNF613Q6PF04 617 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 CMIPQ8IY22 773 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 BCORP1Q8N888 145 aa12.98□□□□□ -0.33
PTPN7-216ENST00000492977 DTWD2Q8NBA8 298 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms