RNA–Protein interactions for RNA: ENST00000492851.1

COL6A1-205, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 435 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-205ENST00000492851 PLGP00747 810 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 PABPC4LP0CB38 370 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 PPP3CBP16298 524 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 IL11P20809 199 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 ME2P23368 584 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 UGT2B10P36537 528 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 EIF1P41567 113 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF41P51814 821 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 CTBP2P56545 445 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 CLDN20P56880 219 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 RAC1P63000 192 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 RPL38P63173 70 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 IFFO1Q0D2I5 559 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 PCLAFQ15004 111 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 LSM12Q3MHD2 195 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 GALNTL6Q49A17 601 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 MFSD12Q6NUT3 480 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 BHLHB9Q6PI77 547 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 ESPNLQ6ZVH7 1005 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 MTERF4Q7Z6M4 381 aaKnown RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 EXOC3L1Q86VI1 746 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 GTPBP8Q8N3Z3 284 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 COX18Q8N8Q8 333 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 BANPQ8N9N5 519 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 ZNF527Q8NB42 609 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 OR4C3Q8NH37 302 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 FNDC9Q8TBE3 224 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 TWIST2Q8WVJ9 160 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 FIG4Q92562 907 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 CAVIN3Q969G5 261 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 CIDECQ96AQ7 238 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 GMPPAQ96IJ6 420 aaPredicted RBP11.21□□□□□ -0.61
COL6A1-205ENST00000492851 WFIKKN1Q96NZ8 548 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 PIP5K1AQ99755 562 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 BTBD2Q9BX70 525 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 RTN4RQ9BZR6 473 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 TIGARQ9NQ88 270 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 PLSCR4Q9NRQ2 329 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 DUSP22Q9NRW4 184 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 FLRT3Q9NZU0 649 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 BAIAP2L1Q9UHR4 511 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 ATP6V1HQ9UI12 483 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 FIS1Q9Y3D6 152 aa11.21□□□□□ -0.61
COL6A1-205ENST00000492851 SPG11Q96JI7 2443 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 A0A1W2PRB8 838 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 EIF1AYO14602 144 aaKnown RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ADAMDEC1O15204 470 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 SYNGR4O95473 234 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 CGAP01215 116 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 IGKV1D-16P01601 117 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 NUDT17P0C025 328 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 BCKDHAP12694 445 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ATP6V1C1P21283 382 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 CRYGSP22914 178 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ADH6P28332 368 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ALDH3A1P30838 453 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 HOXC12P31275 282 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 EIF1AXP47813 144 aaKnown RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 POU6F2P78424 691 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 FOXD4Q12950 439 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 UGT3A2Q3SY77 523 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ATP6AP1LQ52LC2 224 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ARL13AQ5H913 290 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ANKRD26P1Q6NSI1 321 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 VWA1Q6PCB0 445 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ZNF474Q6S9Z5 364 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 PLXDC2Q6UX71 529 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 APOOLQ6UXV4 268 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 GGNQ86UU5 652 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 STK32CQ86UX6 486 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 LRRC75A-AS1Q8N1F1 130 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 OR5M1Q8NGP8 315 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 OR6K3Q8NGY3 331 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 OR2T11Q8NH01 316 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 OR5P2Q8WZ92 322 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 MOAP1Q96BY2 351 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 GIMAP5Q96F15 307 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 C12orf65Q9H3J6 166 aaKnown RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 PIGUQ9H490 435 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 TUBB1Q9H4B7 451 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 L2HGDHQ9H9P8 463 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ZCCHC3Q9NUD5 404 aaKnown RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 FAF1Q9UNN5 650 aaPredicted RBP11.2□□□□□ -0.62
COL6A1-205ENST00000492851 VDAC3Q9Y277 283 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 PTGDR2Q9Y5Y4 395 aa11.2□□□□□ -0.62
COL6A1-205ENST00000492851 ITPR3Q14573 2671 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 GJE1A6NN92 205 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 C17orf51A8MQB3 221 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 FAM171A2A8MVW0 826 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 H0YC42 278 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 FREM3P0C091 2139 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 CD53P19397 219 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 PRPS1L1P21108 318 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 TPD52P55327 224 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 SIRPAP78324 504 aa11.19□□□□□ -0.62
COL6A1-205ENST00000492851 NKX6-1P78426 367 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 MAD2L1Q13257 205 aaPredicted RBP11.19□□□□□ -0.62
COL6A1-205ENST00000492851 TP53BP2Q13625 1128 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 218.7 ms