RNA–Protein interactions for RNA: ENST00000492657.5

PRAME-213, Transcript of preferentially expressed antigen in melanoma, humanhuman

TSL 1 (best)

Gene PRAME, Length 2,831 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-213ENST00000492657 PRKAR1BP31321 381 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 LTBRP36941 435 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 C1orf61Q13536 156 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 KRR1Q13601 381 aaKnown RBP11.98□□□□□ -0.49
PRAME-213ENST00000492657 PIGXQ8TBF5 258 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 ST6GAL2Q96JF0 529 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 SDF2Q99470 211 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 FBRSQ9HAH7 460 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 TIGARQ9NQ88 270 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 CALML5Q9NZT1 146 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 NUFIP1Q9UHK0 495 aaKnown RBP11.98□□□□□ -0.49
PRAME-213ENST00000492657 TBC1D24Q9ULP9 559 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 SCML1Q9UN30 329 aa11.98□□□□□ -0.49
PRAME-213ENST00000492657 SPIN1Q9Y657 262 aaPredicted RBP11.98□□□□□ -0.49
PRAME-213ENST00000492657 A0A0X1KG70 313 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 SMLR1H3BR10 107 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 CDC42EP2O14613 210 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SHC2P98077 582 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 B3GLCTQ6Y288 498 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 LHFPL3Q86UP9 236 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 GLCCI1Q86VQ1 547 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 TRIM69Q86WT6 500 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 ANKK1Q8NFD2 765 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 BBS1Q8NFJ9 593 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 OR9Q1Q8NGQ5 310 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 GPR151Q8TDV0 419 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 MTHFD2LQ9H903 347 aaPredicted RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 SMURF1Q9HCE7 757 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 HRASLS2Q9NWW9 162 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 KLHL28Q9NXS3 571 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 CRNNQ9UBG3 495 aaPredicted RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 CPNE7Q9UBL6 633 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 MUTYHQ9UIF7 546 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 PHF11Q9UIL8 331 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 CD207Q9UJ71 328 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 KCNE5Q9UJ90 142 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SLC7A7Q9UM01 511 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SLCO1B1Q9Y6L6 691 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 CENPXA8MT69 81 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 PEX12O00623 359 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 TYRP1P17643 537 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 NT5EP21589 574 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 PSMA1P25786 263 aaKnown RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 TLX1P31314 330 aaPredicted RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 SSTR4P31391 388 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SLC25A30Q5SVS4 291 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 ZC3H14Q6PJT7 736 aaKnown RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 PAMR1Q6UXH9 720 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 RASSF6Q6ZTQ3 369 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 USP53Q70EK8 1073 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 ZFPM2Q8WW38 1151 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 ZFYVE21Q9BQ24 234 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 MOV10Q9HCE1 1003 aaKnown RBP11.97□□□□□ -0.49
PRAME-213ENST00000492657 NDUFB11Q9NX14 153 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 TOR4AQ9NXH8 423 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 NTMQ9P121 344 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SEC14L4Q9UDX3 406 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 STUB1Q9UNE7 303 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 SEC16AO15027 2179 aa11.97□□□□□ -0.49
PRAME-213ENST00000492657 A0A0G2JMP0 313 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 DUXAA6NLW8 204 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 SCO1O75880 301 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 CT62P0C5K7 136 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ATXN8OSP0DMR3 200 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ZNF136P52737 540 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ILF3Q12906 894 aaKnown RBP eCLIP11.96□□□□□ -0.499e-8■■■■□ 21.6
PRAME-213ENST00000492657 MLLT11Q13015 90 aaPredicted RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 DEFB110Q30KQ9 67 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ZNF628Q5EBL2 1059 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 C22orf42Q6IC83 251 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 FIGNL1Q6PIW4 674 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 OR4F15Q8NGB8 312 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 UBASH3BQ8TF42 649 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 CHAC2Q8WUX2 184 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ACOT11Q8WXI4 607 aaPredicted RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 MAU2Q9Y6X3 613 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 CACNA1IQ9P0X4 2223 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 TNFRSF10CO14798 259 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 PRODHO43272 600 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 SCO2O43819 266 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 CDRT1O95170 752 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 SNX4O95219 450 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 ENDOUP21128 410 aaKnown RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 IFNGR2P38484 337 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 HTR2BP41595 481 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 MTNR1AP48039 350 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 RFX3P48380 749 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 RPS25P62851 125 aaKnown RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 C1DQ13901 141 aaKnown RBP11.96□□□□□ -0.49
PRAME-213ENST00000492657 CDK10Q15131 360 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 BAK1Q16611 211 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 FHL5Q5TD97 284 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 SLC36A4Q6YBV0 504 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 WDR88Q6ZMY6 472 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 DGAT2L6Q6ZPD8 337 aa11.96□□□□□ -0.49
PRAME-213ENST00000492657 LAX1Q8IWV1 398 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms