RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 ZNF670-ZNF695F2Z2N8 137 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SNPHO15079 494 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 GYPBP06028 91 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ZGLP1P0C6A0 271 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CD8BP10966 210 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CELP19835 753 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 KIAA1024LP59773 190 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 MAT1AQ00266 395 aaKnown RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 COX10Q12887 443 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SELENBP1Q13228 472 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 NDUFAF6Q330K2 333 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 KLHL12Q53G59 568 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 DCST2Q5T1A1 773 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF620Q6ZNG0 422 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 NRARPQ7Z6K4 114 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 OR2L13Q8N349 312 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 AVL9Q8NBF6 648 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CYB561A3Q8NBI2 242 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 OR13C2Q8NGS9 318 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 GNPDA2Q8TDQ7 276 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 FAM131CQ96AQ9 280 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ZFYVE21Q9BQ24 234 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ISG20L2Q9H9L3 353 aaKnown RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 HCN3Q9P1Z3 774 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CPNE7Q9UBL6 633 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SEC14L4Q9UDX3 406 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 LIPT1Q9Y234 373 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 DTX4Q9Y2E6 619 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SLC22A7Q9Y694 548 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 CLCA3PQ9Y6N3 262 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 FREM2Q5SZK8 3169 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SURF4O15260 269 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ST6GAL1P15907 406 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ILF3Q12906 894 aaKnown RBP eCLIP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 GNA13Q14344 377 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 LARS2Q15031 903 aaKnown RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF181Q2M3W8 571 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 GXYLT1Q4G148 440 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF628Q5EBL2 1059 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 THSD4Q6ZMP0 1018 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 LINC00299Q6ZSB3 139 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 PEX5LQ8IYB4 626 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 POGLUT1Q8NBL1 392 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 OR51A7Q8NH64 312 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 ACOT11Q8WXI4 607 aaPredicted RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 SECISBP2Q96T21 854 aaKnown RBP11.58□□□□□ -0.56
HMGN1-220ENST00000492280 IL21RQ9HBE5 538 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 TMEM165Q9HC07 324 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 KLHL3Q9UH77 587 aa11.58□□□□□ -0.56
HMGN1-220ENST00000492280 TP53BP1Q12888 1972 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 REM1O75628 298 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 RFPL3O75679 317 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 ALOX5P09917 674 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 IFI30P13284 250 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 GABRA3P34903 492 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 SLC1A3P43003 542 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 NR4A2P43354 598 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 RAB15P59190 212 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF45Q02386 682 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 NDUFA9Q16795 377 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 PGGHGQ32M88 737 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 HEPHL1Q6MZM0 1159 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 CD300LDQ6UXZ3 194 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 RASSF6Q6ZTQ3 369 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TAF8Q7Z7C8 310 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 C7orf57Q8NEG2 295 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 RELTQ969Z4 430 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 RERGQ96A58 199 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TM4SF19Q96DZ7 209 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 SLC38A2Q96QD8 506 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TPSD1Q9BZJ3 242 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 LMAN2LQ9H0V9 348 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 MIXL1Q9H2W2 232 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 COMMD3Q9UBI1 195 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TNRC18O15417 2968 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 A0A1W2PQL4 384 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 LRRN3E7EW58 273 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 SYT5O00445 386 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 MAGEB4O15481 346 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 NOS3P29474 1203 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 PRKAR1BP31321 381 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 LTBRP36941 435 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 ZNF155Q12901 538 aaPredicted RBP11.57□□□□□ -0.56
HMGN1-220ENST00000492280 FAM53BQ14153 422 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 LRIT3Q3SXY7 679 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TMPRSS11AQ6ZMR5 421 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 GATAD2AQ86YP4 633 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 KLBQ86Z14 1044 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 CSNK1A1LQ8N752 337 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 TP53INP1Q96A56 240 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 MOAP1Q96BY2 351 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 SERINC2Q96SA4 455 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 PRSS27Q9BQR3 290 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 OR52D1Q9H346 318 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 LRRN3Q9H3W5 708 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 ANKHQ9HCJ1 492 aa11.57□□□□□ -0.56
HMGN1-220ENST00000492280 A0A0A6YYC8 382 aaPredicted RBP11.56□□□□□ -0.56
HMGN1-220ENST00000492280 A0A1W2PQ09 198 aa11.56□□□□□ -0.56
HMGN1-220ENST00000492280 I3L1I5 382 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms