RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
CDC42SE1-205ENST00000491825 EXD2Q9NVH0 621 aa13.71□□□□□ -0.21
CDC42SE1-205ENST00000491825 COQ3Q9NZJ6 369 aa13.71□□□□□ -0.21
CDC42SE1-205ENST00000491825 SLAMF8Q9P0V8 285 aa13.71□□□□□ -0.21
CDC42SE1-205ENST00000491825 ABCG2Q9UNQ0 655 aa13.71□□□□□ -0.21
CDC42SE1-205ENST00000491825 ANKRD17O75179 2603 aaKnown RBP13.71□□□□□ -0.22
CDC42SE1-205ENST00000491825 HMGN4O00479 90 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 REM1O75628 298 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 PDE9AO76083 593 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 IGKV1D-16P01601 117 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 IGHG3P01860 377 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 C1QCP02747 245 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 P04436 131 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 NGFRP08138 427 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 FOXO1Q12778 655 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 FADDQ13158 208 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 STX5Q13190 355 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 CYLC2Q14093 348 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 TESK1Q15569 626 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 TRMT5Q32P41 509 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 DCST2Q5T1A1 773 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 AP1ARQ63HQ0 302 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 ANGPTL8Q6UXH0 198 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 MEX3BQ6ZN04 569 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 MTERF4Q7Z6M4 381 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 OTUB1Q96FW1 271 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 AURKBQ96GD4 344 aaPredicted RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 LRRC37BQ96QE4 947 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 ANGPTL4Q9BY76 406 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 DEFB127Q9H1M4 99 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 RAD21L1Q9H4I0 556 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 VAPAQ9P0L0 249 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 CORO2BQ9UQ03 480 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 RNF6Q9Y252 685 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 LIPGQ9Y5X9 500 aa13.7□□□□□ -0.22
CDC42SE1-205ENST00000491825 PRAMEF25A6NGN4 478 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 FAM166BA8MTA8 275 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 G3V3Y1 287 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CLIC1O00299 241 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 SNX4O95219 450 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 BMP2P12643 396 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CYP4B1P13584 511 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CNR1P21554 472 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 PRDX6P30041 224 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CHRNB4P30926 498 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 EVI2BP34910 448 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CASP3P42574 277 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 TLE4Q04727 773 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 FUT5Q11128 374 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 NFYCQ13952 458 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 HYAL4Q2M3T9 481 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 ARHGAP11BQ3KRB8 267 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 ATAD3BQ5T9A4 648 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 REP15Q6BDI9 236 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 TMEM211Q6ICI0 200 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 TNFAIP8L2Q6P589 184 aaPredicted RBP13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 TREML1Q86YW5 311 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 TMEM251Q8N6I4 163 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 PCYOX1LQ8NBM8 494 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CCDC197Q8NCU1 140 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 OR5M3Q8NGP4 307 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 LILRB4Q8NHJ6 448 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 PNPT1Q8TCS8 783 aaKnown RBP13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 ASB5Q8WWX0 329 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 OIT3Q8WWZ8 545 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 NODALQ96S42 347 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 CGREF1Q99674 301 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 FAM173AQ9BQD7 235 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 ZNF350Q9GZX5 532 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 PROK2Q9HC23 129 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 MCCC2Q9HCC0 563 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 POLE3Q9NRF9 147 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 LIPT1Q9Y234 373 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 KCNE3Q9Y6H6 103 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 HIVEP1P15822 2718 aa13.69□□□□□ -0.22
CDC42SE1-205ENST00000491825 A0A1B0GVC2 190 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 ACOT7O00154 380 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 FXYD1O00168 92 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 NDUFAB1O14561 156 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 MRASO14807 208 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 ICOSLGO75144 302 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 TOXO94900 526 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 OR12D1P0DN82 309 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 COX4I1P13073 169 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 MSX1P28360 303 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 MAGEA5P43359 124 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 NUP107P57740 925 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 PLGLB1Q02325 96 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 GTF3C1Q12789 2109 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 RGNQ15493 299 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 MMEL1Q495T6 779 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 RUNDC3AQ59EK9 446 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 COX20Q5RI15 118 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 PRAMEF20Q5VT98 475 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 DESI1Q6ICB0 168 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 SLC30A6Q6NXT4 461 aa13.68□□□□□ -0.22
CDC42SE1-205ENST00000491825 FIGNL1Q6PIW4 674 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms