RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
USP4-214ENST00000491791 ADRA2AP08913 450 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 MSL3P1P0C860 447 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 TNNI3P19429 210 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 CDH3P22223 829 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 CTBP2P56545 445 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 HSD17B7P56937 341 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 NXPH1P58417 271 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 HNRNPKP61978 463 aaKnown RBP eCLIP9.97□□□□□ -0.81
USP4-214ENST00000491791 PPP1CAP62136 330 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 NCS1P62166 190 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 PRKCDQ05655 676 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 FUT7Q11130 342 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 MLLT11Q13015 90 aaPredicted RBP9.97□□□□□ -0.81
USP4-214ENST00000491791 C1orf61Q13536 156 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 NR1D2Q14995 579 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF141Q15928 474 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 MAPK14Q16539 360 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF542PQ5EBM4 170 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 SLC36A4Q6YBV0 504 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF730Q6ZMV8 503 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 PLEKHM3Q6ZWE6 761 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 TMPRSS11FQ6ZWK6 438 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF438Q7Z4V0 828 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 SLCO6A1Q86UG4 719 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 CMIPQ8IY22 773 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 MFSD4AQ8N468 514 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 SLC15A4Q8N697 577 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 TCEANCQ8N8B7 351 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 GALNT6Q8NCL4 622 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 SIMC1Q8NDZ2 872 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 KBTBD8Q8NFY9 601 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 OR5T3Q8NGG3 340 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 TEX47Q8TBZ9 253 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 BRIX1Q8TDN6 353 aaKnown RBP9.97□□□□□ -0.81
USP4-214ENST00000491791 CHPT1Q8WUD6 406 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZHX1-C8orf76Q96EF9 292 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 OTUB1Q96FW1 271 aaPredicted RBP9.97□□□□□ -0.81
USP4-214ENST00000491791 HS6ST2Q96MM7 605 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF582Q96NG8 517 aaPredicted RBP9.97□□□□□ -0.81
USP4-214ENST00000491791 SLC38A2Q96QD8 506 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF559Q9BR84 538 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ZNF426Q9BUY5 554 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 MND1Q9BWT6 205 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 ERVMER34-1Q9H9K5 563 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 KCNE5Q9UJ90 142 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 SLCO1B1Q9Y6L6 691 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 CSNK1G3Q9Y6M4 447 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 CDH10Q9Y6N8 788 aa9.97□□□□□ -0.81
USP4-214ENST00000491791 HTR3EA5X5Y0 456 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 ZNF860A6NHJ4 632 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 METTL15A6NJ78 407 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 B4DGG1 531 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 H3BMH7 237 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 MAN1A2O60476 641 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 LDB3O75112 727 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 RDH16O75452 317 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 SOX14O95416 240 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 NADKO95544 446 aaPredicted RBP9.96□□□□□ -0.82
USP4-214ENST00000491791 CT62P0C5K7 136 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 TYRP1P17643 537 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 NT5EP21589 574 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 GADD45AP24522 165 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 HOXA6P31267 233 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 OPRL1P41146 370 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 ETV6P41212 452 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 RBM34P42696 430 aaKnown RBP9.96□□□□□ -0.82
USP4-214ENST00000491791 GPR3P46089 330 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 GCGRP47871 477 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 EMDP50402 254 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 PSMD4P55036 377 aaKnown RBP9.96□□□□□ -0.82
USP4-214ENST00000491791 MAZP56270 477 aaKnown RBP9.96□□□□□ -0.82
USP4-214ENST00000491791 VBP1P61758 197 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 BNC1Q01954 994 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 TMED1Q13445 227 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 SPHARQ15513 63 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 ST3GAL2Q16842 350 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 SYT16Q17RD7 645 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 MINDY4Q4G0A6 757 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 C14orf28Q4W4Y0 310 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 AADACL4Q5VUY2 407 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 RPL13AP3Q6NVV1 102 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 ZNF620Q6ZNG0 422 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 NKAIN4Q8IVV8 208 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 CYP4Z2PQ8N1L4 340 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 VWA5B2Q8N398 1253 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 AMER2Q8N7J2 671 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 FRMD1Q8N878 549 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 COX18Q8N8Q8 333 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 OR8D4Q8NGM9 314 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 OR9A4Q8NGU2 314 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 RFKQ969G6 155 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 MVB12AQ96EY5 273 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 VSTM2LQ96N03 204 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 OPALINQ96PE5 141 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 IL4I1Q96RQ9 567 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 CCNL2Q96S94 520 aaPredicted RBP9.96□□□□□ -0.82
USP4-214ENST00000491791 TSSK6Q9BXA6 273 aa9.96□□□□□ -0.82
USP4-214ENST00000491791 TEX12Q9BXU0 123 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms