RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 NPIPB8E9PQR5 432 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 TRIM13O60858 407 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 SYNGR4O95473 234 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 IGKV1D-16P01601 117 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ALOX5P09917 674 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 LINC00032P0C843 101 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF17P17021 662 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 SDC1P18827 310 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 FPR1P21462 350 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 CRYGSP22914 178 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ME2P23368 584 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 HOXC12P31275 282 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF41P51814 821 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 FIGNL1Q6PIW4 674 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 APOOLQ6UXV4 268 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 R3HCC1LQ7Z5L2 792 aaKnown RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 GALNT10Q86SR1 603 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 COX18Q8N8Q8 333 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 EIF1ADQ8N9N8 165 aaKnown RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF610Q8N9Z0 462 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 GATSQ8NAP1 163 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 EPS8L3Q8TE67 593 aaKnown RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 C18orf12Q96KH6 178 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 GATA5Q9BWX5 397 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 ACSS1Q9NUB1 689 aaPredicted RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 BAIAP2L1Q9UHR4 511 aa17.73■□□□□ 0.43
SREBF1-216ENST00000490796 MCTS1Q9ULC4 181 aaKnown RBP17.73■□□□□ 0.43
SREBF1-216ENST00000490796 SCDO00767 359 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 TBX19O60806 448 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 OXSR1O95747 527 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-216ENST00000490796 TBXA2RP21731 343 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 HPCAL1P37235 193 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 SERPINB4P48594 390 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 PRIM2P49643 509 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 PDSS1Q5T2R2 415 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 Q6ZSR9 355 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF550Q7Z398 422 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 MISPQ8IVT2 679 aa17.72■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF395Q9H8N7 513 aaPredicted RBP17.72■□□□□ 0.43
SREBF1-216ENST00000490796 EML4Q9HC35 981 aaKnown RBP17.72■□□□□ 0.43
SREBF1-216ENST00000490796 PCNX3Q9H6A9 2034 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 TLDC2A0PJX2 215 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 TMEM114B3SHH9 223 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 NGFRP08138 427 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 MAPK1P28482 360 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 RFTN2Q52LD8 501 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-216ENST00000490796 ZNF385BQ569K4 471 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 ZCCHC12Q6PEW1 402 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 OR2T11Q8NH01 316 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 OR4C3Q8NH37 302 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 ZBTB8AQ96BR9 441 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 MTERF3Q96E29 417 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 SH3YL1Q96HL8 342 aaPredicted RBP17.71■□□□□ 0.43
SREBF1-216ENST00000490796 FCRL1Q96LA6 429 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 CCL19Q99731 98 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 UBQLN4Q9NRR5 601 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 CLEC4AQ9UMR7 237 aa17.71■□□□□ 0.43
SREBF1-216ENST00000490796 DEFB108AA8MXU0 73 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 AQP8O94778 261 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 KCNK2O95069 426 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 HSPA4LO95757 839 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 CGAP01215 116 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 INHBBP09529 407 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 ACP2P11117 423 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 LCN1P31025 176 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 RPL3P39023 403 aaKnown RBP17.7■□□□□ 0.42
SREBF1-216ENST00000490796 SLC18A2Q05940 514 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 PCLAFQ15004 111 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 ACKR1Q16570 336 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 DUSP5Q16690 384 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.7■□□□□ 0.42
SREBF1-216ENST00000490796 TMEM44Q2T9K0 475 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 CPTPQ5TA50 214 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 KANK2Q63ZY3 851 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 MFSD12Q6NUT3 480 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 LRIG3Q6UXM1 1119 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 RNF165Q6ZSG1 346 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 GGNQ86UU5 652 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 STK32CQ86UX6 486 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 GTPBP8Q8N3Z3 284 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-216ENST00000490796 SLC16A11Q8NCK7 471 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 OR6K3Q8NGY3 331 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 OR10D3Q8NH80 312 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 ACTRT2Q8TDY3 377 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 CAVIN3Q969G5 261 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 TRIM44Q96DX7 344 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-216ENST00000490796 GMPPAQ96IJ6 420 aaPredicted RBP17.7■□□□□ 0.42
SREBF1-216ENST00000490796 PIP5K1AQ99755 562 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 NTMQ9P121 344 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 SNX8Q9Y5X2 465 aa17.7■□□□□ 0.42
SREBF1-216ENST00000490796 ROS1P08922 2347 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 A0A1W2PRB8 838 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 LSM1O15116 133 aaKnown RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 CXCL13O43927 109 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 OPN1LWP04000 364 aa17.69■□□□□ 0.42
SREBF1-216ENST00000490796 HOXB4P17483 251 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 EFNA1P20827 205 aaPredicted RBP17.69■□□□□ 0.42
SREBF1-216ENST00000490796 ATP6V1C1P21283 382 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms