RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 CCT6AP40227 531 aaKnown RBP3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 KRTAP10-3P60369 221 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 ACTR3P61158 418 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 UBE2HP62256 183 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 IRX3P78415 501 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 IL9RQ01113 521 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 DPYSL2Q16555 572 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 RNF212Q495C1 297 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 C1orf185Q5T7R7 199 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 METAP1DQ6UB28 335 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 GCNT7Q6ZNI0 430 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 STEAP2Q8NFT2 490 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 GTSF1Q8WW33 167 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 SECISBP2Q96T21 854 aaKnown RBP3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 ALG9Q9H6U8 611 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF275Q9NSD4 429 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 B4GALT7Q9UBV7 327 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 BCAP29Q9UHQ4 241 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 NTNG1Q9Y2I2 539 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 MFHAS1Q9Y4C4 1052 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 RNF115Q9Y4L5 304 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF318Q5VUA4 2279 aa3.65□□□□□ -1.83
HMGB1P38-201ENST00000490557 NPC1L1Q9UHC9 1359 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 NCAPD2Q15021 1401 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 A0A1W2PQ72 361 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMEM89A2RUT3 159 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 LRIT2A6NDA9 550 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 A8MX80 341 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRRG1O14668 218 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 CASC3O15234 703 aaKnown RBP3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 POLR2DO15514 142 aaKnown RBP3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 MED7O43513 233 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 CACNG3O60359 315 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 TBX19O60806 448 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 E2F6O75461 281 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 GJB5O95377 273 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 CXCL10P02778 98 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 FGF4P08620 206 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 ANXA8P13928 327 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 RPA2P15927 270 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRKAR2BP31323 418 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 AKT2P31751 481 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 MYBPC1Q00872 1141 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PAX2Q02962 417 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF85Q03923 595 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 SRYQ05066 204 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 TGIF1Q15583 401 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 STK11Q15831 433 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZIC1Q15915 447 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 ANXA8L1Q5VT79 327 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 IL23RQ5VWK5 629 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 LIPKQ5VXJ0 399 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRR5LQ6MZQ0 368 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PRSS48Q7RTY5 328 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 P4HA3Q7Z4N8 544 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 NANOGNBQ7Z5D8 188 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 GOLGA7Q7Z5G4 137 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 CENPLQ8N0S6 344 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF525Q8N782 197 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 Q8N9G6 341 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 OR4F17Q8NGA8 305 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 FCGR1BQ92637 280 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 PSKH2Q96QS6 385 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 OR4F4Q96R69 305 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 GPA33Q99795 319 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 BCL7BQ9BQE9 202 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 EHD1Q9H4M9 534 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMEM231Q9H6L2 316 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 VCPKMTQ9H867 229 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 MGAT4BQ9UQ53 548 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 DHRS7Q9Y394 339 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 MAB21L2Q9Y586 359 aa3.64□□□□□ -1.83
HMGB1P38-201ENST00000490557 TMEM94Q12767 1356 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 A0A0U1RRA0 63 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 GOLGA8OA6NCC3 632 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 A8MU10 97 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 NPIPA2E9PIF3 369 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 GOLGA8NF8WBI6 632 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 G3V3Y1 287 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 K7EQM0 130 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 TOM1L1O75674 476 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 STAMBPO95630 424 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 LY6G6DO95868 133 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 IGSF6O95976 241 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 WNT2P09544 360 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 H2AFZP0C0S5 128 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SLC35E2P0CK97 266 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 CLUP10909 449 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 LAMP1P11279 417 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 TNNI3P19429 210 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 ATP6V1C1P21283 382 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 MDH2P40926 338 aaKnown RBP3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SGSHP51688 502 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 IGLV3-21P80748 117 aaPredicted RBP3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 ZNF33BQ06732 778 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SPAG1Q07617 926 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 SERTAD2Q14140 314 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PDK4Q16654 411 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 PARP6Q2NL67 630 aa3.63□□□□□ -1.83
HMGB1P38-201ENST00000490557 QRICH1Q2TAL8 776 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms