RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 GXYLT2A0PJZ3 443 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 DPRXA6NFQ7 191 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 MYO1GB0I1T2 1018 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 UPK1AO00322 258 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 SSX4O60224 188 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 PSMG1O95456 288 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 KRT6AP02538 564 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 KRT6BP04259 564 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 FESP07332 822 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 ADH6P28332 368 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 TIA1P31483 386 aaKnown RBP eCLIP12.42□□□□□ -0.42
VARS-227ENST00000489979 GABRA3P34903 492 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 MAGEA12P43365 314 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 KRT6CP48668 564 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 RAC1P63000 192 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 ACSM2AQ08AH3 577 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 ZNHIT3Q15649 155 aaPredicted RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 SPIN4Q56A73 249 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 SFRP5Q5T4F7 317 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 ACSM2BQ68CK6 577 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 HBMQ6B0K9 141 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 GTF2IRD2BQ6EKJ0 949 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 TFAP2EQ6VUC0 442 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 NUFIP2Q7Z417 695 aaKnown RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 GTF2IRD2Q86UP8 949 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 EXOC3L1Q86VI1 746 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 OSTF1Q92882 214 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 RNF145Q96MT1 663 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 LMF2Q9BU23 707 aaKnown RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 BEX2Q9BXY8 128 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 ACPTQ9BZG2 426 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 DDX18Q9NVP1 670 aaKnown RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 NFU1Q9UMS0 254 aa12.42□□□□□ -0.42
VARS-227ENST00000489979 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
VARS-227ENST00000489979 A0A096LNT2 108 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 A0A1W2PRB8 838 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 FAM234BA2RU67 622 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 A8MT66 165 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 HAX1O00165 279 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 RAMP1O60894 148 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 ULK1O75385 1050 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 SLITRK5O94991 958 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 ADAP00813 363 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 IGKV1D-16P01601 117 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 DDCP20711 480 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 PSMA4P25789 261 aaKnown RBP12.41□□□□□ -0.42
VARS-227ENST00000489979 HSD17B3P37058 310 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 HTR6P50406 440 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 CLCQ05315 142 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 BTKQ06187 659 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 C2orf54Q08AI8 447 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 C2orf80Q0P641 193 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 RASA2Q15283 850 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 TSNAXIP1Q2TAA8 658 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 TMEM249Q2WGJ8 235 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 TMEM201Q5SNT2 666 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 PDSS1Q5T2R2 415 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 CPTPQ5TA50 214 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 SEZ6L2Q6UXD5 910 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 OR2L13Q8N349 312 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 SPATA4Q8NEY3 305 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 CDC26Q8NHZ8 85 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 PIWIL2Q8TC59 973 aaKnown RBP12.41□□□□□ -0.42
VARS-227ENST00000489979 ABHD3Q8WU67 409 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 ZBTB8AQ96BR9 441 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 KCNK17Q96T54 332 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 MRPL57Q9BQC6 102 aaKnown RBP12.41□□□□□ -0.42
VARS-227ENST00000489979 C1QTNF3Q9BXJ4 246 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 SHCBP1LQ9BZQ2 653 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 KCNF1Q9H3M0 494 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 GLIPR2Q9H4G4 154 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 C3orf14Q9HBI5 128 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 MED17Q9NVC6 651 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 CISD1Q9NZ45 108 aaKnown RBP12.41□□□□□ -0.42
VARS-227ENST00000489979 B3GALT5Q9Y2C3 310 aa12.41□□□□□ -0.42
VARS-227ENST00000489979 C7orf72A4D263 438 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 NDUFB5O43674 189 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 KCNH1O95259 989 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 ANXA4P09525 319 aaPredicted RBP12.4□□□□□ -0.42
VARS-227ENST00000489979 SBK3P0C264 359 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 PTNP21246 168 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 HMOX2P30519 316 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 NUDT6P53370 316 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 CARD18P57730 90 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 C21orf58P58505 322 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 PLPPR5Q32ZL2 321 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 UBAP2Q5T6F2 1119 aaKnown RBP12.4□□□□□ -0.42
VARS-227ENST00000489979 DTX2Q86UW9 622 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 TUSC5Q8IXB3 177 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 BANPQ8N9N5 519 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 GATSQ8NAP1 163 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 OR10H5Q8NGA6 315 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 POC1BQ8TC44 478 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 METTL6Q8TCB7 284 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 RNF128Q8TEB7 428 aa12.4□□□□□ -0.42
VARS-227ENST00000489979 KISS1RQ969F8 398 aaPredicted RBP12.4□□□□□ -0.42
VARS-227ENST00000489979 ELP4Q96EB1 424 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms