RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 PDZK1Q5T2W1 519 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 FGD2Q7Z6J4 655 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 PIGWQ7Z7B1 504 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 PLCZ1Q86YW0 608 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 CHERPQ8IWX8 916 aaKnown RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 GHDCQ8N2G8 530 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 MAL2Q969L2 176 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 RCN3Q96D15 328 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 SH3YL1Q96HL8 342 aaPredicted RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 CCT8L2Q96SF2 557 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 CGREF1Q99674 301 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 CCDC106Q9BWC9 280 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 QRSL1Q9H0R6 528 aaKnown RBP13.13□□□□□ -0.31
HLA-F-229ENST00000489502 MYLK2Q9H1R3 596 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 DSN1Q9H410 356 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 P2RX2Q9UBL9 471 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 TNFRSF10DQ9UBN6 386 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 KCNE5Q9UJ90 142 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 ADAM21Q9UKJ8 722 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 ARL2BPQ9Y2Y0 163 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 PCNX3Q9H6A9 2034 aa13.13□□□□□ -0.31
HLA-F-229ENST00000489502 A0A1B0GTH9 108 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 BBIP1A8MTZ0 92 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 NDUFB5O43674 189 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 SOX30O94993 753 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 NR2F1P10589 423 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 COX4I1P13073 169 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 ENDOUP21128 410 aaKnown RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 ADSLP30566 484 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 LCN1P31025 176 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 ATP12AP54707 1039 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 TXNL4AP83876 142 aaKnown RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 CHRNEQ04844 493 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 FADDQ13158 208 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 CYLC2Q14093 348 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 MAPK14Q16539 360 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 EIF2S3LQ2VIR3 472 aaKnown RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 EIPR1Q53HC9 387 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 BNC2Q6ZN30 1099 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 TRILQ7L0X0 811 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 YRDCQ86U90 279 aaKnown RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 ZNF619Q8N2I2 560 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 FADS6Q8N9I5 356 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 OR2M3Q8NG83 312 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 PHOSPHO1Q8TCT1 267 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 DUSP19Q8WTR2 217 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 ARSGQ96EG1 525 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 TRNT1Q96Q11 434 aaKnown RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 KLHDC3Q9BQ90 382 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 SLC38A1Q9H2H9 487 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 RAD21L1Q9H4I0 556 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 EXO5Q9H790 373 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 PLSCR2Q9NRY7 297 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 MED11Q9P086 117 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 SPRR3Q9UBC9 169 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 SH3BGRL2Q9UJC5 107 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 DKKL1Q9UK85 242 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 OSGIN2Q9Y236 505 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 USP9XQ93008 2570 aaPredicted RBP13.12□□□□□ -0.31
HLA-F-229ENST00000489502 GTF3C1Q12789 2109 aa13.12□□□□□ -0.31
HLA-F-229ENST00000489502 LRRK2Q5S007 2527 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 TRGV5A0A0B4J1U4 118 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 A0A1W2PQD3 144 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 UGT2B17O75795 530 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 WISP1O95388 367 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 IGHG3P01860 377 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 ABOP16442 354 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 PPIBP23284 216 aaKnown RBP13.11□□□□□ -0.31
HLA-F-229ENST00000489502 MAGEA8P43361 318 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 ZNF117Q03924 483 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 SLC10A1Q14973 349 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 KLHL26Q53HC5 615 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 KRTCAP3Q53RY4 240 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 RUNDC3AQ59EK9 446 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 COQ5Q5HYK3 327 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 WIPI1Q5MNZ9 446 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-229ENST00000489502 GCNT6Q5T4J0 391 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 ZNF527Q8NB42 609 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 FAM83FQ8NEG4 500 aaPredicted RBP13.11□□□□□ -0.31
HLA-F-229ENST00000489502 SLC38A5Q8WUX1 472 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 TMEM19Q96HH6 336 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 ANKRD27Q96NW4 1050 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 HOXD1Q9GZZ0 328 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 LDAHQ9H6V9 325 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 POLE3Q9NRF9 147 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 SDHAF3Q9NRP4 125 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 QPCTLQ9NXS2 382 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 LIPT1Q9Y234 373 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 SLC6A5Q9Y345 797 aa13.11□□□□□ -0.31
HLA-F-229ENST00000489502 EVPLLA8MZ36 301 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 HCRTR2O43614 444 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 SLC19A2O60779 497 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 BCAS1O75363 584 aaPredicted RBP13.1□□□□□ -0.31
HLA-F-229ENST00000489502 CBR3O75828 277 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 FAM107AO95990 144 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 HPNP05981 417 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 BMP2P12643 396 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 DPP4P27487 766 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 RBPJQ06330 500 aa13.1□□□□□ -0.31
HLA-F-229ENST00000489502 ZNF141Q15928 474 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms