RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 TMCO1Q9UM00 188 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 DLGAP4Q9Y2H0 992 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 CRYL1Q9Y2S2 319 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 C15orf41Q9Y2V0 281 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 CHCHD2Q9Y6H1 151 aaPredicted RBP6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 HSPG2P98160 4391 aa6.57□□□□□ -1.36
EXOSC3-206ENST00000489414 OR51F1A6NGY5 319 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 SLC22A20A6NK97 555 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 B2RBV5 119 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 H3BMM5 538 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 H7C0S8 307 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CCL22O00626 93 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 SLC22A2O15244 555 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 T-ENOLP0DO92 83 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MED14OSP0DP75 135 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ATP1B2P14415 290 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ITGALP20701 1170 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MAOAP21397 527 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 JAK1P23458 1154 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CCND1P24385 295 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PSMA3P25788 255 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MC4RP32245 332 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PGM1P36871 562 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CDKN1CP49918 316 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 IDH3AP50213 366 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 FABP6P51161 128 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 BTG2P78543 158 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 TNFRSF17Q02223 184 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CHRNB3Q05901 458 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF460Q14592 562 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ARL13AQ5H913 290 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 FNDC7Q5VTL7 733 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 NXNQ6DKJ4 435 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF544Q6NX49 715 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 EPGNQ6UW88 154 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 B3GLCTQ6Y288 498 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 TAS2R42Q7RTR8 314 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 LDB1Q86U70 411 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PIANPQ8IYJ0 282 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF781Q8N8C0 355 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 STEAP2Q8NFT2 490 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 OR6Y1Q8NGX8 325 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 RHEBL1Q8TAI7 183 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 STAG3L4Q8TBR4 150 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MAGEC3Q8TD91 643 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 DACT3Q96B18 629 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 SLC7A6OSQ96CW6 309 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PTCD3Q96EY7 689 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 DCUN1D1Q96GG9 259 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MARS2Q96GW9 593 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 RADILQ96JH8 1075 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 UBXN10Q96LJ8 280 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 GPR78Q96P69 363 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 GPA33Q99795 319 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 EBF4Q9BQW3 602 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CCDC28BQ9BUN5 200 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 ALG9Q9H6U8 611 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 SLC52A3Q9NQ40 469 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PLSCR4Q9NRQ2 329 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 NDE1Q9NXR1 346 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CNIH4Q9P003 139 aa6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 MARCH4Q9P2E8 410 aaPredicted RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 TRMT6Q9UJA5 497 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 PTBP2Q9UKA9 531 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 CNOT11Q9UKZ1 510 aaKnown RBP6.56□□□□□ -1.36
EXOSC3-206ENST00000489414 IGKV1-8A0A0C4DH67 115 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 A0A1W2PPV9 198 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 A8MT66 165 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CAPN14A8MX76 684 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 SUPT3HB4E1H0 165 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 LIN7AO14910 233 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 SUPT3HO75486 399 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CRCPO75575 148 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 S100BP04271 92 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 GFAPP14136 432 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 PKMP14618 531 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF37AP17032 561 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 IMPDH1P20839 514 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 RGS4P49798 205 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 KHKP50053 298 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CDKN2DP55273 166 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 IL2P60568 153 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 HERVK_113P63132 956 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 GALNT1Q10472 559 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 DLG1Q12959 904 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 RIN1Q13671 783 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 PDCD1Q15116 288 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CTU2Q2VPK5 515 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 NRN1LQ496H8 165 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 SH2D4BQ5SQS7 431 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 PTRHD1Q6GMV3 140 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 ZNF619Q8N2I2 560 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 SPATA6LQ8N4H0 392 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 FAM83FQ8NEG4 500 aaPredicted RBP6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 ADCY4Q8NFM4 1077 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 OR5T3Q8NGG3 340 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 CFAP61Q8NHU2 1237 aa6.55□□□□□ -1.36
EXOSC3-206ENST00000489414 AGR3Q8TD06 166 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms