RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 SERINC4A6NH21 518 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 WWP2O00308 870 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 SOCS6O14544 535 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ABCB7O75027 752 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ICOSLGO75144 302 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 CCNB2O95067 398 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 EPPINO95925 133 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 CSTAP01040 98 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 CYP4B1P13584 511 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ACADSP16219 412 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 CDH2P19022 906 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 IGFBP5P24593 272 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ABCD3P28288 659 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 TMED10P49755 219 aaKnown RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 FOXD4Q12950 439 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 EFR3AQ14156 821 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 FGFBP1Q14512 234 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 SSPNQ14714 243 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 LAPTM4AQ15012 233 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 NPTX1Q15818 432 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 EXOC3L2Q2M3D2 409 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 TCTN3Q6NUS6 607 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 KIRREL2Q6UWL6 708 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 TMPRSS7Q7RTY8 843 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 PPP1R32Q7Z5V6 425 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 TMEM179BQ7Z7N9 219 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 MRGPREQ86SM8 312 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ZNF605Q86T29 641 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ZNF440Q8IYI8 595 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 OFCC1Q8IZS5 231 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 HS3ST5Q8IZT8 346 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 IL22RA1Q8N6P7 574 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ATG16L2Q8NAA4 619 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ZSCAN1Q8NBB4 408 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 OR10G2Q8NGC3 310 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 M1APQ8TC57 530 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 GIPC3Q8TF64 312 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 NACC2Q96BF6 587 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 ZNF597Q96LX8 424 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 MCHR1Q99705 422 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 OSBPL11Q9BXB4 747 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 RSPO3Q9BXY4 272 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 TBL1XR1Q9BZK7 514 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 POLR2J2Q9GZM3 115 aaKnown RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 POLR2J3Q9H1A7 115 aaKnown RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 NMNAT1Q9HAN9 279 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 ZNF160Q9HCG1 818 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 MMP25Q9NPA2 562 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 WDR70Q9NW82 654 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 SMPD3Q9NY59 655 aaPredicted RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 USE1Q9NZ43 259 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 TESQ9UGI8 421 aaKnown RBP9.23□□□□□ -0.93
USP11-211ENST00000489111 FBXL4Q9UKA2 621 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 LRRC42Q9Y546 428 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 DMDP11532 3685 aa9.23□□□□□ -0.93
USP11-211ENST00000489111 CROCCQ5TZA2 2017 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 A0A1W2PRQ8 180 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 OR6C70A6NIJ9 312 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 CPSF4LA6NMK7 179 aaKnown RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 GTPBP1O00178 669 aaKnown RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 FAAHO00519 579 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 FFAR1O14842 300 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 TSPAN2O60636 221 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 FMO6PO60774 539 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 PPM1BO75688 479 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 CYP7B1O75881 506 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 OR5F1O95221 314 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 OXSR1O95747 527 aaPredicted RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 HPP00738 406 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 ALPLP05186 524 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 NGFRP08138 427 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 UBTFL6P0CB48 400 aaPredicted RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 THRBP10828 461 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 UBL4AP11441 157 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 ICAM2P13598 275 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 UQCRBP14927 111 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 ENDOUP21128 410 aaKnown RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 TBXA2RP21731 343 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 CLK3P49761 638 aaKnown RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 PNLIPRP2P54317 469 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 RAD23AP54725 363 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 PPP2R2BQ00005 443 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 HOXC5Q00444 222 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 IL1RL1Q01638 556 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 EPS8Q12929 822 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 PIN1Q13526 163 aaPredicted RBP9.22□□□□□ -0.93
USP11-211ENST00000489111 DGCR6Q14129 220 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 RFX4Q33E94 735 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 KLHL26Q53HC5 615 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 C6orf52Q5T4I8 152 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 WLSQ5T9L3 541 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 TBPL2Q6SJ96 375 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 ZNF550Q7Z398 422 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 GRAMD2AQ8IUY3 354 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 TMCO5AQ8N6Q1 288 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 OR4C15Q8NGM1 316 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 OR4C3Q8NH37 302 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 ELP5Q8TE02 316 aa9.22□□□□□ -0.93
USP11-211ENST00000489111 CYGBQ8WWM9 190 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms