RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 ZNF600Q6ZNG1 722 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 ASRGL1Q7L266 308 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 ERICH1Q86X53 443 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 CHCHD4Q8N4Q1 142 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 DEFB124Q8NES8 71 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 FLVCR1-AS1Q8TAF5 88 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 RDH11Q8TC12 318 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 GLYATL1Q969I3 302 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 EEF2KMTQ96G04 330 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 VMP1Q96GC9 406 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 DDX50Q9BQ39 737 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 FAM213AQ9BRX8 229 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 MMADHCQ9H3L0 296 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 PRORYQ9H606 182 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 PRMT8Q9NR22 394 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 CNIH4Q9P003 139 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 ZNF346Q9UL40 294 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 FOXA2Q9Y261 457 aaPredicted RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 MRPS2Q9Y399 296 aaKnown RBP3.29□□□□□ -1.88
ITGB1-214ENST00000488427 MYH1P12882 1939 aa3.29□□□□□ -1.88
ITGB1-214ENST00000488427 SDK2Q58EX2 2172 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 ASTN1O14525 1302 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 ADGRA3Q8IWK6 1321 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 YJEFN3A6XGL0 299 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 E2F3O00716 465 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 HAT1O14929 419 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 PRAMEF12O95522 483 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 GOT2P00505 430 aaKnown RBP3.28□□□□□ -1.88
ITGB1-214ENST00000488427 FCER2P06734 321 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 DNAH10OSP0CZ25 163 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 GPNMBQ14956 572 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 C14orf28Q4W4Y0 310 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 UTF1Q5T230 341 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 ARMC3Q5W041 872 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 CWC27Q6UX04 472 aaKnown RBP3.28□□□□□ -1.88
ITGB1-214ENST00000488427 TMEM184AQ6ZMB5 413 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 PIWIL3Q7Z3Z3 882 aaKnown RBP3.28□□□□□ -1.88
ITGB1-214ENST00000488427 CCDC71Q8IV32 467 aaPredicted RBP3.28□□□□□ -1.88
ITGB1-214ENST00000488427 SLC22A18ASQ8N1D0 253 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 CD177Q8N6Q3 437 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 LPCAT1Q8NF37 534 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 UBTD2Q8WUN7 234 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 TOP1MTQ969P6 601 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 C12orf42Q96LP6 360 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 C2orf40Q9H1Z8 148 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 SLC26A1Q9H2B4 701 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 Q9HAA7 133 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 CWC25Q9NXE8 425 aaPredicted RBP3.28□□□□□ -1.88
ITGB1-214ENST00000488427 RAI14Q9P0K7 980 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 ERVK-18Q9QC07 812 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 TUBGCP4Q9UGJ1 667 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 RSPH14Q9UHP6 348 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 PSORS1C1Q9UIG5 152 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 RNF24Q9Y225 148 aa3.28□□□□□ -1.88
ITGB1-214ENST00000488427 TRAV9-2A0A087WT02 112 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 NPIPA5A0A0B4J1W7 369 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 SPAARA0A1B0GVQ0 90 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 ZSCAN5CA6NGD5 496 aaPredicted RBP3.27□□□□□ -1.89
ITGB1-214ENST00000488427 NPIPA5E9PKD4 350 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 EEF2KO00418 725 aaKnown RBP3.27□□□□□ -1.89
ITGB1-214ENST00000488427 CFLARO15519 480 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 SRPX2O60687 465 aaPredicted RBP3.27□□□□□ -1.89
ITGB1-214ENST00000488427 ATP6V1G1O75348 118 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 GMNNO75496 209 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 TGDSO95455 350 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 SLC25A27O95847 323 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 APRTP07741 180 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 GSTA1P08263 222 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 UMPSP11172 480 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 ZNF18P17022 549 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 MUTP22033 750 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 ADSSP30520 456 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 PRKAR2BP31323 418 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 MFAP2P55001 183 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 STARD6P59095 220 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 OVGP1Q12889 678 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 MICAQ29983 383 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 TTC31Q49AM3 519 aaPredicted RBP3.27□□□□□ -1.89
ITGB1-214ENST00000488427 SLC22A6Q4U2R8 563 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 DCAF12Q5T6F0 453 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 RHBDD2Q6NTF9 364 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 B3GLCTQ6Y288 498 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 PRSS42Q7Z5A4 293 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 HSCBQ8IWL3 235 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 UNC45BQ8IWX7 931 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 PRR22Q8IZ63 422 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 PARP8Q8N3A8 854 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 NAT8LQ8N9F0 302 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 OR6T1Q8NGN1 323 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 VN1R17PQ8TDU5 208 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 CACNG6Q9BXT2 260 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 SLC5A7Q9GZV3 580 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 COMMD8Q9NX08 183 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 IMPAD1Q9NX62 359 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 HOXC10Q9NYD6 342 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 B4GALT7Q9UBV7 327 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 LAMA4Q16363 1823 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 CSPG4Q6UVK1 2322 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 DOCK6Q96HP0 2047 aa3.27□□□□□ -1.89
ITGB1-214ENST00000488427 NID2Q14112 1375 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms