RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 PFDN2Q9UHV9 154 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 ZFR2Q9UPR6 939 aaKnown RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 LIPT1Q9Y234 373 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 A0A1W2PRQ8 180 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 EN2P19622 333 aaPredicted RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 UQCRC2P22695 453 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 ZP1P60852 638 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 MAP4K2Q12851 820 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 PIN1Q13526 163 aaPredicted RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 EOGTQ5NDL2 527 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 FAM71E1Q6IPT2 247 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 TNFAIP8L2Q6P589 184 aaPredicted RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 NLRC3Q7RTR2 1065 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 TECPR1Q7Z6L1 1165 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 TRAPPC5Q8IUR0 188 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 ZNF687Q8N1G0 1237 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 BMPERQ8N8U9 685 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 POGLUT1Q8NBL1 392 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 FBXO15Q8NCQ5 510 aaPredicted RBP13.3□□□□□ -0.28
RER1-207ENST00000488353 IL17FQ96PD4 163 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 OR2AG1Q9H205 316 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 SCPEP1Q9HB40 452 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 BRD7Q9NPI1 651 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 PTGFRNQ9P2B2 879 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 IL36AQ9UHA7 158 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 PLAGL1Q9UM63 463 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 GPR52Q9Y2T5 361 aa13.3□□□□□ -0.28
RER1-207ENST00000488353 A0A1B0GVC2 190 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 A6NIN4 97 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 K7ESM1 405 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 GSTM3P21266 225 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 CCR6P51684 374 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 BLVRAP53004 296 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 ZNF169Q14929 603 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 ENTPD8Q5MY95 495 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 HIST2H2AA3Q6FI13 130 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 FAM109BQ6ICB4 259 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 SLC27A4Q6P1M0 643 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 C1orf94Q6P1W5 598 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 IL20RBQ6UXL0 311 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 SIAH3Q8IW03 269 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 LRRC56Q8IYG6 542 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 C7orf61Q8IZ16 206 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 OR4K5Q8NGD3 323 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 MOSPD2Q8NHP6 518 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 RFKQ969G6 155 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 C7orf50Q9BRJ6 194 aaKnown RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 BTBD1Q9H0C5 482 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 CERS4Q9HA82 394 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 MIEF1Q9NQG6 463 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 ZNF275Q9NSD4 429 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 A4GNTQ9UNA3 340 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 PRELID3BQ9Y3B1 194 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 TRANK1O15050 2925 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 KDM4EB2RXH2 506 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 RGS9O75916 674 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 NMBP08949 121 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 ADH5P11766 374 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 KCNJ5P48544 419 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 SELENOPP49908 381 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 SHC2P98077 582 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 TCTE1Q5JU00 501 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 VASNQ6EMK4 673 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 PSRC1Q6PGN9 363 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 SFTPA1Q8IWL2 248 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 CMIPQ8IY22 773 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 OR4D11Q8NGI4 311 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 OR52N1Q8NH53 320 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 SPRYD4Q8WW59 207 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 RAB8BQ92930 207 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 TMEM19Q96HH6 336 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 FNDC11Q9BVV2 318 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 RSPO3Q9BXY4 272 aaPredicted RBP13.29□□□□□ -0.28
RER1-207ENST00000488353 IFT22Q9H7X7 185 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 CXorf36Q9H7Y0 433 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 MARK1Q9P0L2 795 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 GMEB2Q9UKD1 530 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 LRRK1Q38SD2 2015 aa13.29□□□□□ -0.28
RER1-207ENST00000488353 OTOL1A6NHN0 477 aaPredicted RBP13.28□□□□□ -0.28
RER1-207ENST00000488353 ANKDD1BA6NHY2 528 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 RTCAO00442 366 aaKnown RBP13.28□□□□□ -0.28
RER1-207ENST00000488353 KPNA3O00505 521 aaPredicted RBP13.28□□□□□ -0.28
RER1-207ENST00000488353 FZD7O75084 574 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.28
RER1-207ENST00000488353 HOXB1P14653 301 aaPredicted RBP13.28□□□□□ -0.28
RER1-207ENST00000488353 SLC6A11P48066 632 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 CDH11P55287 796 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 ZSWIM7Q19AV6 140 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 SLC22A10Q63ZE4 541 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 IQCHQ86VS3 1027 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 KLHDC8AQ8IYD2 350 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 OR4F15Q8NGB8 312 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 TEX47Q8TBZ9 253 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 YIPF5Q969M3 257 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 NXPE3Q969Y0 559 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 EFCAB11Q9BUY7 163 aa13.28□□□□□ -0.28
RER1-207ENST00000488353 ABCG4Q9H172 646 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms