RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 CCDC197Q8NCU1 140 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 DNAJB8Q8NHS0 232 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 ARSGQ96EG1 525 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 TMEM19Q96HH6 336 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 ANKRD27Q96NW4 1050 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 GNRHR2Q96P88 292 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 DEFB127Q9H1M4 99 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SLC38A1Q9H2H9 487 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 SLC6A15Q9H2J7 730 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 RAD21L1Q9H4I0 556 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 UBQLN4Q9NRR5 601 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 B4GALT7Q9UBV7 327 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 FBXL2Q9UKC9 423 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 WDR45Q9Y484 360 aa10.08□□□□□ -0.8
UBE4B-210ENST00000488228 USP9XQ93008 2570 aaPredicted RBP10.07□□□□□ -0.8
UBE4B-210ENST00000488228 ARHGAP21Q5T5U3 1957 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 ALG1L2C9J202 215 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 AIM2O14862 343 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 PDE9AO76083 593 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 SOX30O94993 753 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 BMP2P12643 396 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 PLA2G2AP14555 144 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 HPGDP15428 266 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 LCN1P31025 176 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 MAGEA8P43361 318 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 NUDT2P50583 147 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 FOXK1P85037 733 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 TOMM20Q15388 145 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 MAPK14Q16539 360 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 CYP51A1Q16850 503 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 HYAL4Q2M3T9 481 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 PLCZ1Q86YW0 608 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF619Q8N2I2 560 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 OR4K17Q8NGC6 315 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 OR1J4Q8NGS1 313 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 NFKBIDQ8NI38 313 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 RP9Q8TA86 221 aaKnown RBP10.07□□□□□ -0.8
UBE4B-210ENST00000488228 SLC38A5Q8WUX1 472 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 LRRC58Q96CX6 371 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 SH3YL1Q96HL8 342 aaPredicted RBP10.07□□□□□ -0.8
UBE4B-210ENST00000488228 GPR137Q96N19 417 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 TRNT1Q96Q11 434 aaKnown RBP10.07□□□□□ -0.8
UBE4B-210ENST00000488228 LRRC37BQ96QE4 947 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 KLHDC3Q9BQ90 382 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 UBQLN3Q9H347 655 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 ZDHHC11Q9H8X9 412 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 A4GALTQ9NPC4 353 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 ARL8BQ9NVJ2 186 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 SEC14L3Q9UDX4 400 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 CORO2BQ9UQ03 480 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 LIPT1Q9Y234 373 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 L3MBTL1Q9Y468 752 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 GMEB1Q9Y692 573 aa10.07□□□□□ -0.8
UBE4B-210ENST00000488228 MPDZO75970 2070 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 RELNP78509 3460 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 EVPLLA8MZ36 301 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 NDUFB5O43674 189 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 BCAS1O75363 584 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 UGT2B17O75795 530 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 TRAPPC6AO75865 159 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 TFPTP0C1Z6 253 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ARAFP10398 606 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 EDN3P14138 238 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 GPX2P18283 190 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 GNLYP22749 145 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ELAVL4P26378 380 aaKnown RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 CLK3P49761 638 aaKnown RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ATP12AP54707 1039 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 PLAURQ03405 335 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF117Q03924 483 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 KLHL26Q53HC5 615 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 EIPR1Q53HC9 387 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 NANOGP8Q6NSW7 305 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 GFRALQ6UXV0 394 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 LRRC74BQ6ZQY2 392 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 CHERPQ8IWX8 916 aaKnown RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 FITM2Q8N6M3 262 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 TMCO5AQ8N6Q1 288 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ANKS4BQ8N8V4 417 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 FADS6Q8N9I5 356 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ZNF527Q8NB42 609 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 PCYOX1LQ8NBM8 494 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ST6GALNAC3Q8NDV1 305 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 OR2M3Q8NG83 312 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 PHOSPHO1Q8TCT1 267 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 BCAS4Q8TDM0 211 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 DUSP19Q8WTR2 217 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 ZG16BQ96DA0 208 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 TREX2Q9BQ50 279 aaPredicted RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 THUMPD3Q9BV44 507 aaKnown RBP10.06□□□□□ -0.8
UBE4B-210ENST00000488228 DSN1Q9H410 356 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 PIF1Q9H611 641 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 NANOGQ9H9S0 305 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 POLE3Q9NRF9 147 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 MED11Q9P086 117 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 TNFRSF10DQ9UBN6 386 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 DKKL1Q9UK85 242 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 USP22Q9UPT9 525 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
UBE4B-210ENST00000488228 DIDO1Q9BTC0 2240 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms