RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KHDRBS2Q5VWX1 349 aaKnown RBP12.8□□□□□ -0.36
COPS7B-221ENST00000488111 FRMPD2BQ6IN97 320 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 MZT2BQ6NZ67 158 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 COMMD6Q7Z4G1 85 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 OR4N4Q8N0Y3 316 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 MFSD9Q8NBP5 474 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 BAHD1Q8TBE0 780 aaPredicted RBP12.8□□□□□ -0.36
COPS7B-221ENST00000488111 UPRTQ96BW1 309 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 QRFPRQ96P65 431 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 MARVELD1Q9BSK0 173 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 PITHD1Q9GZP4 211 aaPredicted RBP12.8□□□□□ -0.36
COPS7B-221ENST00000488111 AICDAQ9GZX7 198 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 CHST8Q9H2A9 424 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 SSR3Q9UNL2 185 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 PCDHGA5Q9Y5G8 931 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 U3KQA8 63 aa12.8□□□□□ -0.36
COPS7B-221ENST00000488111 LNP1A1A4G5 178 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 NPIPB8E9PQR5 432 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PLPP1O14494 284 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 YKT6O15498 198 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SCN2BO60939 215 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 KLK1P06870 262 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MSL3P1P0C860 447 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ARSBP15848 533 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MAN2A2P49641 1150 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 HNRNPA0Q13151 305 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SF3A2Q15428 464 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 NR0B2Q15466 257 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SPHARQ15513 63 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 DEFB110Q30KQ9 67 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ZNF628Q5EBL2 1059 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 DDI2Q5TDH0 399 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 HDDC2Q7Z4H3 204 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 VN1R4Q7Z5H5 301 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 TBC1D19Q8N5T2 526 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 C11orf24Q96F05 449 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ZBED6CLQ96FA7 236 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 OR2A5Q96R48 311 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PANX1Q96RD7 426 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SOSTQ9BQB4 213 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SEMA6CQ9H3T2 930 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MRPL39Q9NYK5 338 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 FTSJ1Q9UET6 329 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 RUVBL1Q9Y265 456 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 GNG14A0A1W2PPG7 69 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 LRIT2A6NDA9 550 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ZAR1LA6NP61 321 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 CLEC3AO75596 197 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ANXA4P09525 319 aaPredicted RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 ZNF250P15622 560 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MAPK1P28482 360 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 EVI2BP34910 448 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 WNT3P56703 355 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 RPS15AP62244 130 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SNRPNP63162 240 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MRPL28Q13084 256 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PTGES3Q15185 160 aaKnown RBP12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SPIN4Q56A73 249 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PLA2G2CQ5R387 149 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 TEX261Q6UWH6 196 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 KCT2Q8NC54 265 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 MAPKAP1Q9BPZ7 522 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 LRFN3Q9BTN0 628 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 SARGQ9BW04 601 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PILRAQ9UKJ1 303 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 U3KQ87 197 aa12.79□□□□□ -0.36
COPS7B-221ENST00000488111 PCDH15Q96QU1 1955 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ZNF318Q5VUA4 2279 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 I3L521 148 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PCDH7O60245 1069 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TNFRSF21O75509 655 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CTSBP07858 339 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CLEC2LP0C7M8 214 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CKMT1AP12532 417 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ENPP1P22413 925 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CD1CP29017 333 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 SSTR4P31391 388 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 AHRP35869 848 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 EPHA4P54764 986 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 SPIBQ01892 262 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 MXD1Q05195 221 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TCF15Q12870 199 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 MEDAGQ5VYS4 303 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ZNF621Q6ZSS3 439 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PTCHD4Q6ZW05 846 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 UBE3DQ7Z6J8 389 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 AMER3Q8N944 861 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TTLQ8NG68 377 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 AKAP1Q92667 903 aaKnown RBP eCLIP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ZFYVE21Q9BQ24 234 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 RXFP3Q9NSD7 469 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 STARD5Q9NSY2 213 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 TXNL4BQ9NX01 149 aaKnown RBP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 CLEC2DQ9UHP7 191 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 ATXN7L1Q9ULK2 861 aaPredicted RBP12.78□□□□□ -0.36
COPS7B-221ENST00000488111 PCDHGB7Q9Y5F8 929 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 IGHV5-51A0A0C4DH38 117 aa12.78□□□□□ -0.36
COPS7B-221ENST00000488111 C4orf51C9J302 202 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms