RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 FAM213AQ9BRX8 229 aa1.8□□□□□ -2.12
RBM39-234ENST00000487604 UBQLN1Q9UMX0 589 aaKnown RBP1.8□□□□□ -2.12
RBM39-234ENST00000487604 WDR45Q9Y484 360 aa1.8□□□□□ -2.12
RBM39-234ENST00000487604 SNX5Q9Y5X3 404 aa1.8□□□□□ -2.12
RBM39-234ENST00000487604 A0A096LNJ9 63 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 SMIM28A0A1B0GU29 152 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 GCKP35557 465 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 CCR6P51684 374 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 RND3P61587 244 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 ZP4Q12836 540 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 SCARB2Q14108 478 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 GGTLC2Q14390 218 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 UBE2V2Q15819 145 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 PKN2Q16513 984 aaKnown RBP1.79□□□□□ -2.12
RBM39-234ENST00000487604 DNAJC21Q5F1R6 531 aaKnown RBP1.79□□□□□ -2.12
RBM39-234ENST00000487604 PAGE3Q5JUK9 113 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 KPRPQ5T749 579 aaPredicted RBP1.79□□□□□ -2.12
RBM39-234ENST00000487604 SLX4IPQ5VYV7 408 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 YRDCQ86U90 279 aaKnown RBP1.79□□□□□ -2.12
RBM39-234ENST00000487604 LCA5Q86VQ0 697 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 KRTAP13-1Q8IUC0 172 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 ZNF740Q8NDX6 193 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 NDUFAF3Q9BU61 184 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 ABCG4Q9H172 646 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 TMEM245Q9H330 911 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 GHRLQ9UBU3 117 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 COPS7AQ9UBW8 275 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 FBXW2Q9UKT8 454 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 TBX21Q9UL17 535 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 TP53TG5Q9Y2B4 290 aa1.79□□□□□ -2.12
RBM39-234ENST00000487604 ZNF320A2RRD8 509 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 FBLL1A6NHQ2 334 aaKnown RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 GJE1A6NN92 205 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 AKR7A3O95154 331 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 IGLV3-19P01714 112 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 MARCKSP29966 332 aaPredicted RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 RPL4P36578 427 aaKnown RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 EMDP50402 254 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 CNN1P51911 297 aaKnown RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 MAP2K1Q02750 393 aaPredicted RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 SLAQ13239 276 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 KARSQ15046 597 aaKnown RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 PARP6Q2NL67 630 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 PRAMEF7Q5VXH5 474 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 LIPKQ5VXJ0 399 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 OLFM4Q6UX06 510 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 SERPINA12Q8IW75 414 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 RNF182Q8N6D2 247 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 ZNF596Q8TC21 504 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 OR1E3Q8WZA6 343 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 CBWD1Q9BRT8 395 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 CHIAQ9BZP6 476 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 RBM28Q9NW13 759 aaKnown RBP1.78□□□□□ -2.12
RBM39-234ENST00000487604 USP16Q9Y5T5 823 aa1.78□□□□□ -2.12
RBM39-234ENST00000487604 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 IGHV3-64DA0A0J9YX35 117 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 CCDC69A6NI79 296 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 ZSCAN5BA6NJL1 495 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 PES1O00541 588 aaKnown RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 ZNF263O14978 683 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 TIMM44O43615 452 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 SLC35G4P0C7Q5 338 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 AREGP15514 252 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 IGFBP3P17936 291 aaPredicted RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 LONP1P36776 959 aaKnown RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 RPL8P62917 257 aaKnown RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 MRPS6P82932 125 aaKnown RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 SRYQ05066 204 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 BTG3Q14201 252 aaPredicted RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 ZSWIM7Q19AV6 140 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 LRIT3Q3SXY7 679 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 FAM71E1Q6IPT2 247 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 TMEM270Q6UE05 265 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 GOLGA7Q7Z5G4 137 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 HSD11B1LQ7Z5J1 315 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 NET1Q7Z628 596 aaPredicted RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 IFNEQ86WN2 208 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 OR52I1Q8NGK6 324 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 WDR36Q8NI36 951 aaKnown RBP1.77□□□□□ -2.13
RBM39-234ENST00000487604 FAM210BQ96KR6 192 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 RNF126Q9BV68 326 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 GRPEL1Q9HAV7 217 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 INPP5EQ9NRR6 644 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 DCDC2Q9UHG0 476 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 RIMS3Q9UJD0 308 aa1.77□□□□□ -2.13
RBM39-234ENST00000487604 H0Y626 953 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 AIREO43918 545 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 HCN1O60741 890 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 KLF8O95600 359 aaPredicted RBP1.76□□□□□ -2.13
RBM39-234ENST00000487604 CSF2P04141 144 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 RETP07949 1114 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 ZNF286BP0CG31 522 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 OAS2P29728 719 aaKnown RBP1.76□□□□□ -2.13
RBM39-234ENST00000487604 MNAT1P51948 309 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 CASP9P55211 416 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 RCN2Q14257 317 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 NSDHLQ15738 373 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 CDKN3Q16667 212 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 LINC00483Q53H64 154 aa1.76□□□□□ -2.13
RBM39-234ENST00000487604 GLRA4Q5JXX5 417 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms