RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 SGCBQ16585 318 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 TMEM44Q2T9K0 475 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 PPP4R4Q6NUP7 873 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 MFSD12Q6NUT3 480 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 FAM110BQ8TC76 370 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 NUDT8Q8WV74 236 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 MS4A4EQ96PG1 132 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 RNF122Q9H9V4 155 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 MKS1Q9NXB0 559 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 C6orf203Q9P0P8 240 aaPredicted RBP22.08■■□□□ 1.13
LIME1-206ENST00000487026 ZNF175Q9Y473 711 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 TESMINQ9Y4I5 508 aa22.08■■□□□ 1.13
LIME1-206ENST00000487026 ALG1L2C9J202 215 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 PEX11AO75192 247 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 AQP8O94778 261 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 GOSR1O95249 250 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 CGAP01215 116 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 ASMTP46597 345 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 RPS3AP61247 264 aaKnown RBP22.07■■□□□ 1.12
LIME1-206ENST00000487026 CCNJQ5T5M9 372 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 GGNQ86UU5 652 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 METTL25Q8N6Q8 603 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 ZNF610Q8N9Z0 462 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 OR7A2PQ8NGA2 310 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.07■■□□□ 1.123e-7■□□□□ 10.3
LIME1-206ENST00000487026 SH3YL1Q96HL8 342 aaPredicted RBP22.07■■□□□ 1.12
LIME1-206ENST00000487026 KLHDC3Q9BQ90 382 aa22.07■■□□□ 1.12
LIME1-206ENST00000487026 EIF3LQ9Y262 564 aaKnown RBP22.07■■□□□ 1.12
LIME1-206ENST00000487026 EIF1AYO14602 144 aaKnown RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 SLU7O95391 586 aaKnown RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 ALOX5P09917 674 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 TBXA2RP21731 343 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 KCNJ5P48544 419 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 R3HCC1LQ7Z5L2 792 aaKnown RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 COX18Q8N8Q8 333 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 OR6Y1Q8NGX8 325 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 TCP10LQ8TDR4 215 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 JADE3Q92613 823 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 MTERF3Q96E29 417 aa22.06■■□□□ 1.12
LIME1-206ENST00000487026 FAM120BQ96EK7 910 aaKnown RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 EML4Q9HC35 981 aaKnown RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 SIRT3Q9NTG7 399 aaPredicted RBP22.06■■□□□ 1.12
LIME1-206ENST00000487026 SIAH2O43255 324 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 LAMP1P11279 417 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 POU2F1P14859 743 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 CD53P19397 219 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 ARRB2P32121 409 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 EIF1AXP47813 144 aaKnown RBP22.05■■□□□ 1.12
LIME1-206ENST00000487026 SLC6A8P48029 635 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.05■■□□□ 1.12
LIME1-206ENST00000487026 WFDC11Q8NEX6 87 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 CHMP6Q96FZ7 201 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 C3orf30Q96M34 536 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 C1orf50Q9BV19 199 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 GSX1Q9H4S2 264 aaPredicted RBP22.05■■□□□ 1.12
LIME1-206ENST00000487026 ATP6V1HQ9UI12 483 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 CLEC4AQ9UMR7 237 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 SNX8Q9Y5X2 465 aa22.05■■□□□ 1.12
LIME1-206ENST00000487026 FLNAP21333 2647 aaKnown RBP22.05■■□□□ 1.12
LIME1-206ENST00000487026 A0A1W2PRB8 838 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 SCAMP2O15127 329 aaKnown RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 CTIFO43310 598 aaKnown RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 HMGN2P05204 90 aaKnown RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 NGFRP08138 427 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 CREB1P16220 341 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 UGT2B10P36537 528 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 HPCAL1P37235 193 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 RNF144AP50876 292 aaPredicted RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 VSNL1P62760 191 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 IFFO1Q0D2I5 559 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 EXOSC6Q5RKV6 272 aaKnown RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 ANKRD34AQ69YU3 496 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 LRIG3Q6UXM1 1119 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 ZNF550Q7Z398 422 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 RIBC1Q8N443 379 aaPredicted RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 PPP3R2Q96LZ3 170 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 SLC39A3Q9BRY0 314 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 MED18Q9BUE0 208 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 PRRG4Q9BZD6 226 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 ZCCHC3Q9NUD5 404 aaKnown RBP22.04■■□□□ 1.12
LIME1-206ENST00000487026 ELOVL5Q9NYP7 299 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 LGALS13Q9UHV8 139 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 ZDHHC2Q9UIJ5 367 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 PROCRQ9UNN8 238 aa22.04■■□□□ 1.12
LIME1-206ENST00000487026 NIPBLQ6KC79 2804 aaeCLIP22.04■■□□□ 1.12
LIME1-206ENST00000487026 A0A087WZY1 265 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 TMEM114B3SHH9 223 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 NUDT17P0C025 328 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 CD8BP10966 210 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 HPGDP15428 266 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 CCKARP32238 428 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 PRIM2P49643 509 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 POU6F2P78424 691 aaPredicted RBP22.03■■□□□ 1.12
LIME1-206ENST00000487026 LASP1Q14847 261 aaKnown RBP22.03■■□□□ 1.12
LIME1-206ENST00000487026 PTGR1Q14914 329 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 GUSBP1Q15486 140 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 EXOC3L2Q2M3D2 409 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 XKR7Q5GH72 579 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 CPTPQ5TA50 214 aa22.03■■□□□ 1.12
LIME1-206ENST00000487026 ZCCHC12Q6PEW1 402 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms