RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 CPNE7Q9UBL6 633 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 PAIP2BQ9ULR5 123 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 EXOGQ9Y2C4 368 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 YARS2Q9Y2Z4 477 aaKnown RBP16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 HS3ST3A1Q9Y663 406 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 COL4A2P08572 1712 aa16.73■□□□□ 0.27
PDLIM7-207ENST00000486828 A0A0J9YY10 115 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CYR61O00622 381 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CDC42EP2O14613 210 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SNPHO15079 494 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 GPR75O95800 540 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 FOSL2P15408 326 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 NT5EP21589 574 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 GABRA5P31644 462 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 TGM4P49221 684 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 HNRNPA0Q13151 305 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 MANEAQ5SRI9 462 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 NXNL2Q5VZ03 156 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 ZCCHC12Q6PEW1 402 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CCBE1Q6UXH8 406 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SMRP1Q8NCR6 262 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 TMEM52Q8NDY8 209 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 RPLP0P6Q8NHW5 317 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 GPBAR1Q8TDU6 330 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 DOK4Q8TEW6 326 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 C1GALT1C1Q96EU7 318 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 INIPQ9NRY2 104 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 F5P12259 2224 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 TCRBV21S2A2A0A5A6 115 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 TNFP01375 233 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 IFI6P09912 130 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CLEC2LP0C7M8 214 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 NID1P14543 1247 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 HTR1FP30939 366 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CD79BP40259 229 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SLC9A3P48764 834 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 UBE2IP63279 158 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SHC2P98077 582 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 DSG2Q14126 1118 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 PRICKLE4Q2TBC4 344 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 EOGTQ5NDL2 527 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 MRPL2Q5T653 305 aaKnown RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 OR8H2Q8N162 312 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 COX18Q8N8Q8 333 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 OR13H1Q8NG92 308 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 OR4F15Q8NGB8 312 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SETD6Q8TBK2 473 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 TMCO6Q96DC7 493 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 SAMD8Q96LT4 415 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 PLEKHB1Q9UF11 243 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 ZNF223Q9UK11 482 aaPredicted RBP16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 CBLCQ9ULV8 474 aa16.72■□□□□ 0.27
PDLIM7-207ENST00000486828 H3BQ06 376 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 GALR3O60755 368 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 IGHA1P01876 353 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 PRG2P13727 222 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 GABRG2P18507 467 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 HTR2AP28223 471 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 FGF9P31371 208 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 GCGRP47871 477 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 CRTC2Q53ET0 693 aaPredicted RBP16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 CD200R1LQ6Q8B3 271 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 LHFPL3Q86UP9 236 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 SHISA5Q8N114 240 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 OR5T3Q8NGG3 340 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 BRIX1Q8TDN6 353 aaKnown RBP16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 HRASLS2Q9NWW9 162 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 TOR4AQ9NXH8 423 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 MAT2BQ9NZL9 334 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 KCNE5Q9UJ90 142 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 TBC1D24Q9ULP9 559 aa16.71■□□□□ 0.27
PDLIM7-207ENST00000486828 UNC119BA6NIH7 251 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SLC2A10O95528 541 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 AK1P00568 194 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 GKN3PP0CG01 181 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SDC2P34741 201 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 MAP3K8P41279 467 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 RABIFP47224 123 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 MGAT2Q10469 447 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SELENBP1Q13228 472 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 OR1Q1Q15612 314 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF79Q15937 498 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 HSDL2Q6YN16 418 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 RNF113BQ8IZP6 322 aaKnown RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SLC22A18ASQ8N1D0 253 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CA13Q8N1Q1 262 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SDR16C5Q8N3Y7 309 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CSNK1A1LQ8N752 337 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 BBS1Q8NFJ9 593 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 TM9SF2Q99805 663 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 ZNF649Q9BS31 505 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 JAM3Q9BX67 310 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 SRRQ9GZT4 340 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 UBQLN3Q9H347 655 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 RERGLQ9H628 205 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 C8orf33Q9H7E9 229 aaPredicted RBP16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 FBXO34Q9NWN3 711 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 IL20RAQ9UHF4 553 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 MUTYHQ9UIF7 546 aa16.7■□□□□ 0.26
PDLIM7-207ENST00000486828 CLCA2Q9UQC9 943 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms