RNA–Protein interactions for RNA: ENST00000486116.5

PTPN7-213, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-213ENST00000486116 MMP27Q9H306 513 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 ANKZF1Q9H8Y5 726 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 CNOT10Q9H9A5 744 aaKnown RBP8.43□□□□□ -1.06
PTPN7-213ENST00000486116 GP6Q9HCN6 339 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 SDHAF3Q9NRP4 125 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 DDX28Q9NUL7 540 aaKnown RBP8.43□□□□□ -1.06
PTPN7-213ENST00000486116 PDP1Q9P0J1 537 aaPredicted RBP8.43□□□□□ -1.06
PTPN7-213ENST00000486116 CES1P1Q9UKY3 287 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 TRAF6Q9Y4K3 522 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 COL7A1Q02388 2944 aa8.43□□□□□ -1.06
PTPN7-213ENST00000486116 IGLV3-32A0A0A0MS00 114 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 CCT8L1PA6NM43 557 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 TPM1P09493 284 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 PABPC4LP0CB38 370 aaKnown RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 PIK3CBP42338 1070 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 KCNJ1P48048 391 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 VPS41P49754 854 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 CARD18P57730 90 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 RAC1P63000 192 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 IL13RA1P78552 427 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 TRIP13Q15645 432 aaPredicted RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 CCNG2Q16589 344 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 SEL1L2Q5TEA6 688 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 FAHD2BQ6P2I3 314 aaPredicted RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 DRICH1Q6PGQ1 229 aaPredicted RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 Q6ZPA2 131 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 GSTA5Q7RTV2 222 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 C1QL2Q7Z5L3 287 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 GALNT7Q86SF2 657 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 NUDT13Q86X67 352 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 TCAIMQ8N3R3 496 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 GTPBP8Q8N3Z3 284 aaPredicted RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 BPIFB2Q8N4F0 458 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 NKAPQ8N5F7 415 aaKnown RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 FAHD2AQ96GK7 314 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 RNF145Q96MT1 663 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 TSPY26PQ9H489 355 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 CXorf36Q9H7Y0 433 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 FKRPQ9H9S5 495 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 XAB2Q9HCS7 855 aaKnown RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 ABCG2Q9UNQ0 655 aa8.42□□□□□ -1.06
PTPN7-213ENST00000486116 REXO2Q9Y3B8 237 aaKnown RBP8.42□□□□□ -1.06
PTPN7-213ENST00000486116 PIN1P1O15428 100 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 CCNT2O60583 730 aaKnown RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 ERAL1O75616 437 aaKnown RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 PDE5AO76074 875 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 PRKD3O94806 890 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 BCL10O95999 233 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 PNPP00491 289 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 TPM3P06753 285 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 IFNGR1P15260 489 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 MRPS22P82650 360 aaKnown RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 POU4F1Q01851 419 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 ZNF628Q5EBL2 1059 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 ARL13AQ5H913 290 aaPredicted RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 SH2D4BQ5SQS7 431 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 PDSS1Q5T2R2 415 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 GRHL2Q6ISB3 625 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 FAM180BQ6P0A1 224 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 SLC48A1Q6P1K1 146 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 FCRLAQ7L513 359 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 CNGA4Q8IV77 575 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 ZNF786Q8N393 782 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 TRIM58Q8NG06 486 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 CLDND2Q8NHS1 167 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 POC1BQ8TC44 478 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 C22orf15Q8WYQ4 148 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 CPNE4Q96A23 557 aaPredicted RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 REXO5Q96IC2 774 aaKnown RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 KLHL15Q96M94 604 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 DUX5Q96PT3 197 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 PSD2Q9BQI7 771 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 BCO1Q9HAY6 547 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 G6PC2Q9NQR9 355 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 FAM120CQ9NX05 1096 aaKnown RBP8.41□□□□□ -1.06
PTPN7-213ENST00000486116 NTMQ9P121 344 aa8.41□□□□□ -1.06
PTPN7-213ENST00000486116 IGHV3-15A0A0B4J1V0 119 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 C7orf72A4D263 438 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 DNAJC9-AS1A6NH13 148 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 GOLGA6L10A6NI86 522 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 LYNX1G3V0Z9 82 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 NDUFB5O43674 189 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 IL33O95760 270 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 LYNX1P0DP58 116 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 ADRA2CP18825 462 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 CSNK2A2P19784 350 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 MDKP21741 143 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 PTX3P26022 381 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 SFTPDP35247 375 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 SERPINF1P36955 418 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 KHKP50053 298 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 PPOXP50336 477 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 IDH3GP51553 393 aaPredicted RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 MANFP55145 182 aaKnown RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 PSPHP78330 225 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 SLC25A3Q00325 362 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 CSTF3Q12996 717 aaKnown RBP8.4□□□□□ -1.06
PTPN7-213ENST00000486116 CUL3Q13618 768 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 TEDDM1Q5T9Z0 273 aa8.4□□□□□ -1.06
PTPN7-213ENST00000486116 SULT1C3Q6IMI6 304 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms