RNA–Protein interactions for RNA: ENST00000485820.1

YIF1A-208, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, human

TSL 2

Gene YIF1A, Length 653 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
YIF1A-208	ENST00000485820	ZNF708	P17019	499 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	IGFBP2	P18065	325 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	HK1	P19367	917 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	TCEA1	P23193	301 aa	Known RBP	13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	IL12A	P29459	219 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	CLDN18	P56856	261 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	SRY	Q05066	204 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	HSPB2	Q16082	182 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	TMEM44	Q2T9K0	475 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	SPANXN4	Q5MJ08	99 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	ANXA8L1	Q5VT79	327 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	HDX	Q7Z353	690 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	ANKRD46	Q86W74	232 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	PIWIL2	Q8TC59	973 aa	Known RBP	13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	C1GALT1C1	Q96EU7	318 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	SFXN2	Q96NB2	322 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR7D2	Q96RA2	312 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	UCN2	Q96RP3	112 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	TRIM8	Q9BZR9	551 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	SERHL2	Q9H4I8	314 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	PTGES2	Q9H7Z7	377 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820	ZNF337	Q9Y3M9	751 aa		13.56	□□□□□ -0.24
YIF1A-208	ENST00000485820		A0A1W2PQD3	144 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	CPSF4	O95639	269 aa	Known RBP	13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	IL2RA	P01589	272 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	KRT16	P08779	473 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	MATN1	P21941	496 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	MSX1	P28360	303 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	ZNF136	P52737	540 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	CLNS1A	P54105	237 aa	Known RBP	13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	NME5	P56597	212 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	CLDN15	P56746	228 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	RCAN2	Q14206	197 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	GANAB	Q14697	944 aa	Known RBP	13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	DPY19L1	Q2PZI1	675 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	GLYR1	Q49A26	553 aa	Predicted RBP	13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	SLC9B1	Q4ZJI4	515 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	KLHL26	Q53HC5	615 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	BHLHB9	Q6PI77	547 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	GATS	Q8NAP1	163 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	VPS37A	Q8NEZ2	397 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR5D16	Q8NGK9	328 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR4A15	Q8NGL6	344 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR5M1	Q8NGP8	315 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	CHMP6	Q96FZ7	201 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	SDF2	Q99470	211 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	PCDHGB4	Q9UN71	923 aa		13.55	□□□□□ -0.24
YIF1A-208	ENST00000485820	HEATR5A	Q86XA9	2040 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR2M5	A3KFT3	312 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	DUXA	A6NLW8	204 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820		E9PBE3	544 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	NPIPB9	F8W1W9	429 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	UQCRC2	P22695	453 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	S100A3	P33764	101 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	SOAT1	P35610	550 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	DGKQ	P52824	942 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	RPS26	P62854	115 aa	Known RBP	13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	CD226	Q15762	336 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	SLC25A35	Q3KQZ1	300 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	FAM174B	Q3ZCQ3	159 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	DCST2	Q5T1A1	773 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	ARSK	Q6UWY0	536 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	PLXDC2	Q6UX71	529 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	MEX3B	Q6ZN04	569 aa	Known RBP	13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	C9orf106	Q8NAJ2	232 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	RELL2	Q8NC24	303 aa	Predicted RBP	13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	MIPOL1	Q8TD10	442 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	ACTRT2	Q8TDY3	377 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	OR52B2	Q96RD2	323 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	KLHDC3	Q9BQ90	382 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	HOXD1	Q9GZZ0	328 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	VIPAS39	Q9H9C1	493 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	BTNL2	Q9UIR0	455 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	MPDZ	O75970	2070 aa		13.54	□□□□□ -0.24
YIF1A-208	ENST00000485820	TEX15	Q9BXT5	2789 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	NPIPA5	A0A0B4J1W7	369 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	RNF103-CHMP3	A0A140T963	221 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	CLCA1	A8K7I4	914 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820		C9JVG2	144 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	NPIPA7	E9PJI5	369 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820		H0Y3Z8	333 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	LINC01387	J3KSC0	135 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	SYT5	O00445	386 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	SCD	O00767	359 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	GMFG	O60234	142 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	RCBTB2	O95199	551 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	C1QC	P02747	245 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	NPIPA8	P0DM63	369 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	PEPD	P12955	493 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	HPGD	P15428	266 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	SUCLG1	P53597	346 aa	Known RBP	13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	ATP12A	P54707	1039 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	CASP9	P55211	416 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	DLX5	P56178	289 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	AP1AR	Q63HQ0	302 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	EPGN	Q6UW88	154 aa		13.53	□□□□□ -0.24
YIF1A-208	ENST00000485820	MISP	Q8IVT2	679 aa		13.53	□□□□□ -0.24

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