RNA–Protein interactions for RNA: ENST00000485804.5

SPIN1-206, Transcript of spindlin 1, humanhuman

TSL 3

Gene SPIN1, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-206ENST00000485804 C2orf80Q0P641 193 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 ZNHIT3Q15649 155 aaPredicted RBP16.96■□□□□ 0.31
SPIN1-206ENST00000485804 SPDYAQ5MJ70 313 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 TMEM107Q6UX40 140 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 SPATA3Q8NHX4 192 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 ELP4Q96EB1 424 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 C1GALT1C1Q96EU7 318 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 PLPPR2Q96GM1 343 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 GLIPR2Q9H4G4 154 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 MIEF1Q9NQG6 463 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 FAM120CQ9NX05 1096 aaKnown RBP16.96■□□□□ 0.31
SPIN1-206ENST00000485804 VDAC3Q9Y277 283 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 AP4B1Q9Y6B7 739 aa16.96■□□□□ 0.31
SPIN1-206ENST00000485804 CHD3Q12873 2000 aaKnown RBP16.96■□□□□ 0.3
SPIN1-206ENST00000485804 PSMD4P55036 377 aaKnown RBP16.95■□□□□ 0.3
SPIN1-206ENST00000485804 PDE7AQ13946 482 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 VEZF1Q14119 521 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 LIPMQ5VYY2 423 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 METTL25Q8N6Q8 603 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 OR6K3Q8NGY3 331 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 CCT7Q99832 543 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 RTN4RQ9BZR6 473 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 DDX18Q9NVP1 670 aaKnown RBP16.95■□□□□ 0.3
SPIN1-206ENST00000485804 MID2Q9UJV3 735 aa16.95■□□□□ 0.3
SPIN1-206ENST00000485804 KLF4O43474 513 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 SYNGR4O95473 234 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 IL33O95760 270 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 THBDP07204 575 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 FGF4P08620 206 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 NEFHP12036 1026 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 NTSP30990 170 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 C17orf67Q0P5P2 114 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 TNK1Q13470 666 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 IMPG1Q17R60 797 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 GLYR1Q49A26 553 aaPredicted RBP16.94■□□□□ 0.3
SPIN1-206ENST00000485804 EXOSC6Q5RKV6 272 aaKnown RBP16.94■□□□□ 0.3
SPIN1-206ENST00000485804 Q6ZSR9 355 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 STK32CQ86UX6 486 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 GSPT2Q8IYD1 628 aaKnown RBP16.94■□□□□ 0.3
SPIN1-206ENST00000485804 MAPK1IP1LQ8NDC0 245 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 C1orf109Q9NX04 203 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 MCTS1Q9ULC4 181 aaKnown RBP16.94■□□□□ 0.3
SPIN1-206ENST00000485804 LAMP3Q9UQV4 416 aa16.94■□□□□ 0.3
SPIN1-206ENST00000485804 CSPG4Q6UVK1 2322 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 USF3Q68DE3 2245 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 SLC28A1O00337 649 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 COPEO14579 308 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 HS3ST1O14792 307 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 NDUFB5O43674 189 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 UTS2O95399 124 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 ANGPTL1O95841 491 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 OPN1LWP04000 364 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 NGFRP08138 427 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 SLC6A8P48029 635 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 RPS4XP62701 263 aaKnown RBP16.93■□□□□ 0.3
SPIN1-206ENST00000485804 PCLAFQ15004 111 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 CFAP157Q5JU67 520 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 STAC2Q6ZMT1 411 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 SLC9A6Q92581 669 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 AKAP1Q92667 903 aaKnown RBP eCLIP16.93■□□□□ 0.3
SPIN1-206ENST00000485804 GMPPAQ96IJ6 420 aaPredicted RBP16.93■□□□□ 0.3
SPIN1-206ENST00000485804 EGLN2Q96KS0 407 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 GATA5Q9BWX5 397 aaPredicted RBP16.93■□□□□ 0.3
SPIN1-206ENST00000485804 ACTR6Q9GZN1 396 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 C12orf49Q9H741 205 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 C3orf14Q9HBI5 128 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 HHATLQ9HCP6 504 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 PLSCR4Q9NRQ2 329 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 TMED5Q9Y3A6 229 aa16.93■□□□□ 0.3
SPIN1-206ENST00000485804 POLR3HQ9Y535 204 aaPredicted RBP16.93■□□□□ 0.3
SPIN1-206ENST00000485804 TLN2Q9Y4G6 2542 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 RNF223E7ERA6 249 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 AZIN1O14977 448 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 CRLF1O75462 422 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 TP53P04637 393 aaPredicted RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 NUDT17P0C025 328 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 KRT4P19013 534 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 DMTNQ08495 405 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 GUSBP1Q15486 140 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 CLEC12BQ2HXU8 276 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 TMEM44Q2T9K0 475 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 CTU2Q2VPK5 515 aaKnown RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 UGT3A2Q3SY77 523 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 KANK2Q63ZY3 851 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 BEND4Q6ZU67 534 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 WDR75Q8IWA0 830 aaKnown RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 RIBC1Q8N443 379 aaPredicted RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 ZNF611Q8N823 705 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 OR10D3Q8NH80 312 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 MTERF3Q96E29 417 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 TRMT61AQ96FX7 289 aaKnown RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 TACO1Q9BSH4 297 aaKnown RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 TUBB1Q9H4B7 451 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 EQTNQ9NQ60 294 aa16.92■□□□□ 0.3
SPIN1-206ENST00000485804 ACSS1Q9NUB1 689 aaPredicted RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 ZNF701Q9NV72 531 aaPredicted RBP16.92■□□□□ 0.3
SPIN1-206ENST00000485804 ROS1P08922 2347 aa16.91■□□□□ 0.3
SPIN1-206ENST00000485804 CLOCKO15516 846 aa16.91■□□□□ 0.3
SPIN1-206ENST00000485804 CXCL13O43927 109 aa16.91■□□□□ 0.3
SPIN1-206ENST00000485804 TRIM13O60858 407 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms