RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 PERPQ96FX8 193 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 ADGRG7Q96K78 797 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 COX4I2Q96KJ9 171 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 OXSMQ9NWU1 459 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 C1orf109Q9NX04 203 aa17.25■□□□□ 0.35
COL27A1-205ENST00000485397 NPIPB8E9PQR5 432 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 SLC28A1O00337 649 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 NDUFB5O43674 189 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 SHBGP04278 402 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CPA3P15088 417 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CTU2Q2VPK5 515 aaKnown RBP17.24■□□□□ 0.35
COL27A1-205ENST00000485397 SZRD1Q7Z422 152 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 YTHDF3Q7Z739 585 aaKnown RBP17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CEP112Q8N8E3 955 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CDRT4Q8N9R6 151 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 OR6K3Q8NGY3 331 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 OR2T11Q8NH01 316 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CEP70Q8NHQ1 597 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 CLHC1Q8NHS4 586 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 PPCDCQ96CD2 204 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 C16orf58Q96GQ5 468 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 METTL2AQ96IZ6 378 aaKnown RBP17.24■□□□□ 0.35
COL27A1-205ENST00000485397 TSSK3Q96PN8 268 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 KLHDC3Q9BQ90 382 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 REEP4Q9H6H4 257 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 PLSCR4Q9NRQ2 329 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 FBXO34Q9NWN3 711 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 SH3BP4Q9P0V3 963 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 BAIAP2L1Q9UHR4 511 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 EMC9Q9Y3B6 208 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 FIS1Q9Y3D6 152 aa17.24■□□□□ 0.35
COL27A1-205ENST00000485397 FN1P02751 2386 aaKnown RBP17.24■□□□□ 0.35
COL27A1-205ENST00000485397 UQCRHLA0A096LP55 91 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 A0A1W2PRB8 838 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 SMAD7O15105 426 aaKnown RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 RGS14O43566 566 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 CXCL13O43927 109 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 KCNK2O95069 426 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 PLGP00747 810 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 ZNF17P17021 662 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 SDC1P18827 310 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 EFNA1P20827 205 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 CRHR1P34998 444 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 CCT5P48643 541 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 MANFP55145 182 aaKnown RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 CTBP2P56545 445 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 SLC18A2Q05940 514 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 DUSP5Q16690 384 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 VPS26BQ4G0F5 336 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 PRSS57Q6UWY2 283 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 C20orf204Q6ZNR8 217 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 WDR75Q8IWA0 830 aaKnown RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 GTPBP8Q8N3Z3 284 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 SLC16A11Q8NCK7 471 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 FAM110BQ8TC76 370 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 OTUB1Q96FW1 271 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 ZNF764Q96H86 408 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 SH3YL1Q96HL8 342 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 GMPPAQ96IJ6 420 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-205ENST00000485397 FCRL1Q96LA6 429 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 TUBB1Q9H4B7 451 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 TMEM185BQ9H7F4 350 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 MED17Q9NVC6 651 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 NTMQ9P121 344 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 STOML1Q9UBI4 398 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 DSCAMO60469 2012 aa17.23■□□□□ 0.35
COL27A1-205ENST00000485397 A0A087WZY1 265 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 TRIM64A6NGJ6 449 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 TRIM64BA6NI03 449 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 AZIN1O14977 448 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 KLF4O43474 513 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 TBX19O60806 448 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 SS18L1O75177 396 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 PSMA4P25789 261 aaKnown RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 PLPPR5Q32ZL2 321 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 LIPMQ5VYY2 423 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 MFSD12Q6NUT3 480 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 STAC2Q6ZMT1 411 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 CNPY4Q8N129 248 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 OR2V1Q8NHB1 315 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 ZFP28Q8NHY6 868 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 POC1BQ8TC44 478 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 CAVIN3Q969G5 261 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 ZBED6CLQ96FA7 236 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 RNF145Q96MT1 663 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 CCT7Q99832 543 aa17.22■□□□□ 0.35
COL27A1-205ENST00000485397 GATA5Q9BWX5 397 aaPredicted RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 MCTS1Q9ULC4 181 aaKnown RBP17.22■□□□□ 0.35
COL27A1-205ENST00000485397 HEATR5AQ86XA9 2040 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 ROS1P08922 2347 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 A0A0J9YW62 118 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 SMIM23A6NLE4 172 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 FAM171A2A8MVW0 826 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 COPEO14579 308 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 TNFSF11O14788 317 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 PLAUP00749 431 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 NGFRP08138 427 aa17.21■□□□□ 0.35
COL27A1-205ENST00000485397 LINC00032P0C843 101 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms