RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 ADAMDEC1O15204 470 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 SEC14L5O43304 696 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 SHBGP04278 402 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF17P17021 662 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 GCAP28676 217 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 CRHR1P34998 444 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ATP5J2P56134 94 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 SGCBQ16585 318 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 UNC50Q53HI1 259 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 TCHHL1Q5QJ38 904 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF678Q5SXM1 525 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 BEND4Q6ZU67 534 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 GPRIN3Q6ZVF9 776 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 SLC22A9Q8IVM8 553 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 METTL6Q8TCB7 284 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 EPS8L3Q8TE67 593 aaKnown RBP11.66□□□□□ -0.54
HDAC6-227ENST00000485102 HOXB13Q92826 284 aaPredicted RBP11.66□□□□□ -0.54
HDAC6-227ENST00000485102 APIPQ96GX9 242 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ADGRG7Q96K78 797 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ZIM3Q96PE6 472 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 BBS4Q96RK4 519 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 LMF2Q9BU23 707 aaKnown RBP11.66□□□□□ -0.54
HDAC6-227ENST00000485102 Q9N2J8 555 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 FLRT3Q9NZU0 649 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 STK38LQ9Y2H1 464 aa11.66□□□□□ -0.54
HDAC6-227ENST00000485102 ALPK2Q86TB3 2170 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 A0A087WZY1 265 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 SMIM23A6NLE4 172 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 H3BQF6 201 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 SUPT7LO94864 414 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ENO1P06733 434 aaKnown RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 THBS1P07996 1170 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 NGFRP08138 427 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ANXA4P09525 319 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 KRT4P19013 534 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 IMPDH1P20839 514 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 MAP3K8P41279 467 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 SLC6A8P48029 635 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 PRKAA2P54646 552 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 PKNOX1P55347 436 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF844Q08AG5 666 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF763Q0D2J5 394 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ZNF155Q12901 538 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 TNK1Q13470 666 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ZNHIT3Q15649 155 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 CTU2Q2VPK5 515 aaKnown RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 UBAP2Q5T6F2 1119 aaKnown RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 FAM71E1Q6IPT2 247 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 APOOLQ6UXV4 268 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 DNAJC14Q6Y2X3 702 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 MARCH3Q86UD3 253 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 WDR75Q8IWA0 830 aaKnown RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 GTPBP8Q8N3Z3 284 aaPredicted RBP11.65□□□□□ -0.54
HDAC6-227ENST00000485102 OR5M1Q8NGP8 315 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 FAM76AQ8TAV0 307 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ACTRT2Q8TDY3 377 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 ELP4Q96EB1 424 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 HDHD5Q9BXW7 423 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 C3orf14Q9HBI5 128 aa11.65□□□□□ -0.54
HDAC6-227ENST00000485102 PLCE1Q9P212 2302 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 ALG1L2C9J202 215 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 ANGPTL1O95841 491 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PLAUP00749 431 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 JUNP05412 331 aaKnown RBP11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PYGBP11216 843 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 NID1P14543 1247 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PSMA4P25789 261 aaKnown RBP11.64□□□□□ -0.55
HDAC6-227ENST00000485102 HMOX2P30519 316 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 NCBP2P52298 156 aaKnown RBP eCLIP11.64□□□□□ -0.55
HDAC6-227ENST00000485102 CTBP2P56545 445 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 RAC1P63000 192 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 SLC18A2Q05940 514 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 C2orf80Q0P641 193 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 STX5Q13190 355 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PRSS53Q2L4Q9 553 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 EXOC3L2Q2M3D2 409 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 SH2D4BQ5SQS7 431 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 GTF2IRD2BQ6EKJ0 949 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 GTF2IRD2Q86UP8 949 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 STK32CQ86UX6 486 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 TRABD2AQ86V40 505 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 KIRREL3Q8IZU9 778 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 OR10D3Q8NH80 312 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 L3HYPDHQ96EM0 354 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PLPPR2Q96GM1 343 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 AMDHD1Q96NU7 426 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 USB1Q9BQ65 265 aaKnown RBP11.64□□□□□ -0.55
HDAC6-227ENST00000485102 PRRG4Q9BZD6 226 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 TBL1XR1Q9BZK7 514 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 ACTR6Q9GZN1 396 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 CENPHQ9H3R5 247 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 GLIPR2Q9H4G4 154 aa11.64□□□□□ -0.55
HDAC6-227ENST00000485102 MCTS1Q9ULC4 181 aaKnown RBP11.64□□□□□ -0.55
HDAC6-227ENST00000485102 DYNC1I1O14576 645 aa11.63□□□□□ -0.55
HDAC6-227ENST00000485102 EIF1AYO14602 144 aaKnown RBP11.63□□□□□ -0.55
HDAC6-227ENST00000485102 TM9SF1O15321 606 aa11.63□□□□□ -0.55
HDAC6-227ENST00000485102 TLX2O43763 284 aaPredicted RBP11.63□□□□□ -0.55
HDAC6-227ENST00000485102 DLX3O60479 287 aa11.63□□□□□ -0.55
HDAC6-227ENST00000485102 SNUPNO95149 360 aaKnown RBP11.63□□□□□ -0.55
HDAC6-227ENST00000485102 UTS2O95399 124 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms