RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SF3A3Q12874 501 aaKnown RBP eCLIP14.73□□□□□ -0.05
DDR1-246ENST00000485023 CD226Q15762 336 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 FLYWCH1Q4VC44 716 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 TMEM211Q6ICI0 200 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 C16orf62Q7Z3J2 963 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 RNF130Q86XS8 419 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 RFWD2Q8NHY2 731 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 RND1Q92730 232 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 TTYH2Q9BSA4 534 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 CCDC28BQ9BUN5 200 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 PTGES2Q9H7Z7 377 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 COQ3Q9NZJ6 369 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 RNF6Q9Y252 685 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 PCDHGB3Q9Y5G1 929 aa14.73□□□□□ -0.05
DDR1-246ENST00000485023 SPTAN1Q13813 2472 aaKnown RBP14.72□□□□□ -0.05
DDR1-246ENST00000485023 FAM90A27PA6NNH2 459 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 H0Y3Z8 333 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 NR5A2O00482 541 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 RFXANKO14593 260 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 EDF1O60869 148 aaKnown RBP14.72□□□□□ -0.05
DDR1-246ENST00000485023 ANP32DO95626 131 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 ACTL6AO96019 429 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 IL6P05231 212 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 NGFRP08138 427 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 C17orf67Q0P5P2 114 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 GPR68Q15743 365 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 NDUFAF6Q330K2 333 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 GTDC1Q4AE62 458 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 ACSF3Q4G176 576 aaPredicted RBP14.72□□□□□ -0.05
DDR1-246ENST00000485023 NHSL2Q5HYW2 709 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 C6orf10Q5SRN2 563 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 ZNF787Q6DD87 383 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 XKRXQ6PP77 449 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 ARSKQ6UWY0 536 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 HMGN2P46Q86SG4 172 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 TRIML2Q8N7C3 387 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 GOT1L1Q8NHS2 421 aaPredicted RBP14.72□□□□□ -0.05
DDR1-246ENST00000485023 PHOSPHO1Q8TCT1 267 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 CA5BP1Q8WTZ4 195 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 XAGE5Q8WWM1 108 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 NEURL3Q96EH8 262 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 C1GALT1C1Q96EU7 318 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 DTNBP1Q96EV8 351 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 WDYHV1Q96HA8 205 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 TRIB1Q96RU8 372 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 PRDM14Q9GZV8 571 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 SLC6A13Q9NSD5 602 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 VDAC3Q9Y277 283 aa14.72□□□□□ -0.05
DDR1-246ENST00000485023 A0A0G2JND7 137 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 CENPVL1A0A0U1RR11 272 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 FAM234BA2RU67 622 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 DUXAA6NLW8 204 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 OIP5O43482 229 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 HCRTR2O43614 444 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 ZIC3O60481 467 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 TNFRSF21O75509 655 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 CLDN14O95500 239 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 GABRA1P14867 456 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 ADH7P40394 386 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 GFRA1P56159 465 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 B3GALT5-AS1P59052 145 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.71□□□□□ -0.05
DDR1-246ENST00000485023 ATAD3BQ5T9A4 648 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 AAGABQ6PD74 315 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 SLC2A7Q6PXP3 512 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 PLXDC2Q6UX71 529 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 PM20D2Q8IYS1 436 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 UBQLNLQ8IYU4 475 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 ZNF527Q8NB42 609 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 SMPDL3BQ92485 455 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 SDF2Q99470 211 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 KLHDC3Q9BQ90 382 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 RMND5AQ9H871 391 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 EXD2Q9NVH0 621 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 MKLN1Q9UL63 735 aa14.71□□□□□ -0.05
DDR1-246ENST00000485023 A0A0G2JNJ9 132 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 H3BML4 177 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 SEC14L5O43304 696 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 FCMRO60667 390 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 NCF2P19878 526 aaPredicted RBP14.7□□□□□ -0.06
DDR1-246ENST00000485023 POU3F2P20265 443 aaPredicted RBP14.7□□□□□ -0.06
DDR1-246ENST00000485023 HTR1EP28566 365 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 LCN1P31025 176 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 GUCY1A3Q02108 690 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 ZNF117Q03924 483 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 FUT5Q11128 374 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 ART3Q13508 389 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 GANABQ14697 944 aaKnown RBP14.7□□□□□ -0.06
DDR1-246ENST00000485023 GPAT3Q53EU6 434 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 COX20Q5RI15 118 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 PDZK1Q5T2W1 519 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 ENPP6Q6UWR7 440 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 ARFGAP2Q8N6H7 521 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 TMCO5AQ8N6Q1 288 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 CHDHQ8NE62 594 aaPredicted RBP14.7□□□□□ -0.06
DDR1-246ENST00000485023 MIPOL1Q8TD10 442 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 AURKBQ96GD4 344 aaPredicted RBP14.7□□□□□ -0.06
DDR1-246ENST00000485023 ITCHQ96J02 903 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 TUBA1CQ9BQE3 449 aa14.7□□□□□ -0.06
DDR1-246ENST00000485023 UCK2Q9BZX2 261 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms