RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 COLGALT1Q8NBJ5 622 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF596Q8TC21 504 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 DTD2Q96FN9 168 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 TMEM80Q96HE8 168 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 TMEM245Q9H330 911 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 FAM124BQ9H5Z6 455 aaPredicted RBP2.06□□□□□ -2.08
SCAF11-207ENST00000484275 DUS2Q9NX74 493 aaKnown RBP2.06□□□□□ -2.08
SCAF11-207ENST00000484275 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 FAM153AQ9UHL3 310 aa2.06□□□□□ -2.08
SCAF11-207ENST00000484275 EXOSC1Q9Y3B2 195 aaKnown RBP2.06□□□□□ -2.08
SCAF11-207ENST00000484275 A0A096LNJ9 63 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 A0A0U1RRA0 63 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 A0A1W2PRV1 198 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 TMEM150BA6NC51 233 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ZSCAN5BA6NJL1 495 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 C19orf81C9J6K1 198 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 TM9SF1O15321 606 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 RAMP1O60894 148 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 HSP90AA1P07900 732 aaKnown RBP2.05□□□□□ -2.08
SCAF11-207ENST00000484275 GNSP15586 552 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 MRPS11P82912 194 aaKnown RBP2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ZP4Q12836 540 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF154Q13106 437 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 UBE2V2Q15819 145 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ACSF3Q4G176 576 aaPredicted RBP2.05□□□□□ -2.08
SCAF11-207ENST00000484275 FAM133BQ5BKY9 247 aaKnown RBP2.05□□□□□ -2.08
SCAF11-207ENST00000484275 SLC39A4Q6P5W5 647 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 C11orf88Q6PI97 169 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 RNF165Q6ZSG1 346 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF410Q86VK4 478 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ARFGAP2Q8N6H7 521 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 PHYHIPQ92561 330 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ART4Q93070 314 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 PTP4A1Q93096 173 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 RNF185Q96GF1 192 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 CBWD1Q9BRT8 395 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 ING2Q9H160 280 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 NARFLQ9H6Q4 476 aa2.05□□□□□ -2.08
SCAF11-207ENST00000484275 NBR2O15453 112 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 PPIHO43447 177 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 MED6O75586 246 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 HSP90AB1P08238 724 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 CCNA2P20248 432 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 RPL4P36578 427 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 RPL29P47914 159 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 SLAQ13239 276 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF674Q2M3X9 581 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 LRIT3Q3SXY7 679 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 AGKQ53H12 422 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 LEG1Q6P5S2 330 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF562Q6V9R5 426 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 STAC2Q6ZMT1 411 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 BPIFB2Q8N4F0 458 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 SPATA13Q96N96 652 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 NDUFAF3Q9BU61 184 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 KAT8Q9H7Z6 458 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 FANCFQ9NPI8 374 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 CWC25Q9NXE8 425 aaPredicted RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 TBX21Q9UL17 535 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 IFT52Q9Y366 437 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 USP16Q9Y5T5 823 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 WIF1Q9Y5W5 379 aa2.04□□□□□ -2.08
SCAF11-207ENST00000484275 FBN1P35555 2871 aaKnown RBP2.04□□□□□ -2.08
SCAF11-207ENST00000484275 GRIN2DO15399 1336 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 NKX2-6A6NCS4 301 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 FBLL1A6NHQ2 334 aaKnown RBP2.03□□□□□ -2.08
SCAF11-207ENST00000484275 A8MUA0 341 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 H0YL77 283 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF264O43296 627 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 EFNA2O43921 213 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 FMO6PO60774 539 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF286BP0CG31 522 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 OAS2P29728 719 aaKnown RBP2.03□□□□□ -2.08
SCAF11-207ENST00000484275 SRYQ05066 204 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 SF3A2Q15428 464 aaKnown RBP2.03□□□□□ -2.08
SCAF11-207ENST00000484275 SMU1Q2TAY7 513 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 HFEQ30201 348 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 TEX44Q53QW1 395 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 BTNL3Q6UXE8 466 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 FAM220AQ7Z4H9 259 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF695Q8IW36 515 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 TMEM252Q8N6L7 170 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 LRRC17Q8N6Y2 441 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 NKAIN3Q8N8D7 197 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 OR2T33Q8NG76 320 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 OR9A4Q8NGU2 314 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 WDR36Q8NI36 951 aaKnown RBP2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ADIPOR1Q96A54 375 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 CAB39LQ9H9S4 337 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 WFDC1Q9HC57 220 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ANKMY1Q9P2S6 941 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 GHRLQ9UBU3 117 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 TP53TG5Q9Y2B4 290 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 ZNF835Q9Y2P0 537 aa2.03□□□□□ -2.08
SCAF11-207ENST00000484275 DHX57Q6P158 1386 aaKnown RBP2.02□□□□□ -2.09
SCAF11-207ENST00000484275 K7N7A8 449 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ADAM12O43184 909 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 CHRNA1P02708 482 aa2.02□□□□□ -2.09
SCAF11-207ENST00000484275 ZNF18P17022 549 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms