RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 MUC3AQ02505 3323 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 PEX12O00623 359 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 OR10H3O60404 316 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 TPST2O60704 377 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 ZGLP1P0C6A0 271 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 DRD5P21918 477 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 FUT4P22083 530 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 TMBIM6P55061 237 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 CXCR4P61073 352 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 COX10Q12887 443 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 SEC23BQ15437 767 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 CD300LDQ6UXZ3 194 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 CMIPQ8IY22 773 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 BMPERQ8N8U9 685 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 LHPPQ9H008 270 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 SLC26A1Q9H2B4 701 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 FBXO8Q9NRD0 319 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 PCDHGB1Q9Y5G3 927 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 R4GN57 208 aa24.28■■□□□ 1.48
SHOX2-204ENST00000483851 OR6C76A6NM76 312 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 EFCAB7A8K855 629 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 NPIPB9F8W1W9 429 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 CYP4B1P13584 511 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 PCMT1P22061 227 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 IFNGR2P38484 337 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 EFNA3P52797 238 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 UGT2B15P54855 530 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 ENTPD8Q5MY95 495 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 PODNL1Q6PEZ8 512 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 CNIH3Q8TBE1 160 aa24.27■■□□□ 1.48
SHOX2-204ENST00000483851 ST6GALNAC1Q9NSC7 600 aaPredicted RBP24.27■■□□□ 1.48
SHOX2-204ENST00000483851 TESQ9UGI8 421 aaKnown RBP24.27■■□□□ 1.48
SHOX2-204ENST00000483851 CENPVL1A0A0U1RR11 272 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 LCN1P31025 176 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF136P52737 540 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 ATP12AP54707 1039 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 PSPHP78330 225 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 MC2RQ01718 297 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 PGBD2Q6P3X8 592 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 LAPTM4BQ86VI4 370 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 BCORP1Q8N888 145 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 OR4N2Q8NGD1 307 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 MUL1Q969V5 352 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 UCK2Q9BZX2 261 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 OR8D2Q9GZM6 311 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 HOXD1Q9GZZ0 328 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 DUSP21Q9H596 190 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 MRTO4Q9UKD2 239 aaKnown RBP24.26■■□□□ 1.47
SHOX2-204ENST00000483851 FRG2CA6NGY1 282 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 VSTM2BA6NLU5 285 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 CPNE3O75131 537 aaKnown RBP24.26■■□□□ 1.47
SHOX2-204ENST00000483851 IGKV1D-16P01601 117 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 ZNF806P0C7X5 589 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 ITIH1P19827 911 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 EPHA2P29317 976 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 CCKBRP32239 447 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 IL5RAQ01344 420 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 DECR1Q16698 335 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 PLEKHM3Q6ZWE6 761 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 B3GNT8Q7Z7M8 397 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 CCDC71Q8IV32 467 aaPredicted RBP24.26■■□□□ 1.47
SHOX2-204ENST00000483851 COPS7AQ9UBW8 275 aa24.26■■□□□ 1.47
SHOX2-204ENST00000483851 CLDN24A6NM45 220 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 FRS3O43559 492 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 ANGPTL1O95841 491 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 GGT2P36268 569 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 PIGFQ07326 219 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 C1orf94Q6P1W5 598 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 KLHL17Q6TDP4 642 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 ZAR1Q86SH2 424 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 ZSCAN1Q8NBB4 408 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 OR4K5Q8NGD3 323 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 OR1N1Q8NGS0 311 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 GTPBP3Q969Y2 492 aaKnown RBP24.25■■□□□ 1.47
SHOX2-204ENST00000483851 LCORQ96JN0 433 aaPredicted RBP24.25■■□□□ 1.47
SHOX2-204ENST00000483851 LRFN5Q96NI6 719 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 NODALQ96S42 347 aa24.25■■□□□ 1.47
SHOX2-204ENST00000483851 A0A1B0GVG6 124 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 CPSF4LA6NMK7 179 aaKnown RBP24.24■■□□□ 1.47
SHOX2-204ENST00000483851 A8MUA0 341 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 OSMP13725 252 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 ILKQ13418 452 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 DEPDC4Q8N2C3 294 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 BPIFB6Q8NFQ5 453 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 RXFP3Q9NSD7 469 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 SEMA4GQ9NTN9 838 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 PCDHGA6Q9Y5G7 932 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 GSTM3P21266 225 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 TEKQ02763 1124 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 FGFBP1Q14512 234 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 MAD2L1BPQ15013 274 aaPredicted RBP24.24■■□□□ 1.47
SHOX2-204ENST00000483851 PDZK1Q5T2W1 519 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 C17orf47Q8NEP4 570 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 ADIPOR1Q96A54 375 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 APMAPQ9HDC9 416 aa24.24■■□□□ 1.47
SHOX2-204ENST00000483851 AKAP7Q9P0M2 348 aaPredicted RBP24.24■■□□□ 1.47
SHOX2-204ENST00000483851 NPIPA5A0A0B4J1W7 369 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 B4E171 279 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 NPIPA7E9PJI5 369 aa24.23■■□□□ 1.47
SHOX2-204ENST00000483851 TMX2-CTNND1H3BSU7 103 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms