RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 METTL2BQ6P1Q9 378 aaKnown RBP5.32□□□□□ -1.56
CSDE1-207ENST00000483407 KLC3Q6P597 504 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PRSS57Q6UWY2 283 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 CHMP1BQ7LBR1 199 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PAGE2Q7Z2X7 111 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 P4HA3Q7Z4N8 544 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 CMC1Q7Z7K0 106 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 IFNEQ86WN2 208 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 GRAMD2AQ8IUY3 354 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 L3MBTL4Q8NA19 623 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 SLC44A1Q8WWI5 657 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 ATP6V1E2Q96A05 226 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 INTS12Q96CB8 462 aaKnown RBP5.32□□□□□ -1.56
CSDE1-207ENST00000483407 NXNL1Q96CM4 212 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 TMCO6Q96DC7 493 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 OMA1Q96E52 524 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 LCORQ96JN0 433 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-207ENST00000483407 TUBA1CQ9BQE3 449 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 BDH2Q9BUT1 245 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 OR2B2Q9GZK3 357 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 NXF5Q9H1B4 397 aaKnown RBP5.32□□□□□ -1.56
CSDE1-207ENST00000483407 MANSC1Q9H8J5 431 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 SERHLQ9NQF3 203 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 ZNF226Q9NYT6 803 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 RNF14Q9UBS8 474 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PRODH2Q9UF12 536 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 BCAP29Q9UHQ4 241 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 ADAM29Q9UKF5 820 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PACSIN3Q9UKS6 424 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PSME2Q9UL46 239 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 EXO1Q9UQ84 846 aaKnown RBP5.32□□□□□ -1.56
CSDE1-207ENST00000483407 PMF1-BGLAPU3KQ54 211 aa5.32□□□□□ -1.56
CSDE1-207ENST00000483407 A0A1W2PS29 197 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 C1orf226A1L170 272 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 H7C1Q1 480 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 PLOD2O00469 737 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CTIFO43310 598 aaKnown RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ICOSLGO75144 302 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ERAL1O75616 437 aaKnown RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CLDN9O95484 217 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 LY6G6DO95868 133 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ATP1B1P05026 303 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 C2P06681 752 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CRHP06850 196 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 KLK1P06870 262 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CT62P0C5K7 136 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CSNK2A2P19784 350 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CNTFP26441 200 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ECHS1P30084 290 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 SRD5A2P31213 254 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 KRT20P35900 424 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 SLCO1A2P46721 670 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 MAPK12P53778 367 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 GNG11P61952 73 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 PSPHP78330 225 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 PPP2R2BQ00005 443 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 IFT88Q13099 833 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 MLANAQ16655 118 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CCNYL2Q5T2Q4 361 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 FRG2Q64ET8 278 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 OR2A2Q6IF42 318 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 GOLGA7Q7Z5G4 137 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ADGRE4PQ86SQ3 457 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 PLCZ1Q86YW0 608 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 GCNT2Q8N0V5 402 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 GBP7Q8N8V2 638 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 SIMC1Q8NDZ2 872 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 NUDT10Q8NFP7 164 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 WDR20Q8TBZ3 569 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 RDH11Q8TC12 318 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 TRPC4APQ8TEL6 797 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 KCTD4Q8WVF5 259 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 HGDQ93099 445 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ARSGQ96EG1 525 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 NUDT11Q96G61 164 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 MRGPRX4Q96LA9 322 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 Q96MF0 132 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 SFXN2Q96NB2 322 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 FAM111AQ96PZ2 611 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 FRG2BQ96QU4 278 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 NODALQ96S42 347 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CCL19Q99731 98 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 NAPGQ99747 312 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ERP44Q9BS26 406 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 MED18Q9BUE0 208 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 FAIM2Q9BWQ8 316 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ITPAQ9BY32 194 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 DPH5Q9H2P9 285 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 ELOVL6Q9H5J4 265 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 NOL11Q9H8H0 719 aaKnown RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 BCO1Q9HAY6 547 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 GALNT9Q9HCQ5 603 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 TAS2R10Q9NYW0 307 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 C6orf203Q9P0P8 240 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CPSF2Q9P2I0 782 aaKnown RBP5.31□□□□□ -1.56
CSDE1-207ENST00000483407 CLCF1Q9UBD9 225 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 TRPS1Q9UHF7 1281 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 TAGLN3Q9UI15 199 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 DKKL1Q9UK85 242 aa5.31□□□□□ -1.56
CSDE1-207ENST00000483407 DLGAP4Q9Y2H0 992 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms