RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 H2BFSP57053 126 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR2B8PP59922 312 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 RPS27AP62979 156 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 UBA52P62987 128 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 BIKQ13323 160 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 HACD4Q5VWC8 232 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF783Q6ZMS7 281 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CBLL1Q75N03 491 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TECPR1Q7Z6L1 1165 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR2G2Q8NGZ5 317 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 THAP4Q8WY91 577 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 GTPBP3Q969Y2 492 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 ZNF385AQ96PM9 386 aaKnown RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 OR52E6Q96RD3 313 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 PARD6GQ9BYG4 376 aaPredicted RBP7.34□□□□□ -1.23
COL4A5-205ENST00000483338 LAT2Q9GZY6 243 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 MFFQ9GZY8 342 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 CTPS2Q9NRF8 586 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 TREX1Q9NSU2 369 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 GALPQ9UBC7 116 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FTSJ1Q9UET6 329 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 FZD4Q9ULV1 537 aa7.34□□□□□ -1.23
COL4A5-205ENST00000483338 LRRC37AA6NMS7 1700 aa7.34□□□□□ -1.24
COL4A5-205ENST00000483338 MGAMO43451 1857 aa7.34□□□□□ -1.24
COL4A5-205ENST00000483338 WDR81Q562E7 1941 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 A6NLC8 198 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FADS1O60427 444 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 MPZL2O60487 215 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PRAF2O60831 178 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SC5DO75845 299 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FEN1P39748 380 aaKnown RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PMELP40967 661 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 AKR1C3P42330 323 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SULT1E1P49888 294 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CXADRP78310 365 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TRA2AQ13595 282 aaKnown RBP eCLIP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ARHGEF7Q14155 803 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 IDNKQ5T6J7 187 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 RNLSQ5VYX0 342 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ETFRF1Q6IPR1 90 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ACSM5Q6NUN0 579 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 LRRTM1Q86UE6 522 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 KLHDC8BQ8IXV7 354 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CDK20Q8IZL9 346 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 LGI4Q8N135 537 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CPXM2Q8N436 756 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 OR6J1Q8NGC5 347 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 NEIL3Q8TAT5 605 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ATG4CQ96DT6 458 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CCNL2Q96S94 520 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 COLEC11Q9BWP8 271 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 NT5C1AQ9BXI3 368 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ZDHHC5Q9C0B5 715 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 FBXO44Q9H4M3 255 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SERHLQ9NQF3 203 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PARPBPQ9NWS1 579 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 hCG_1809904A0A1W2PP81 198 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 A0A1W2PR64 198 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 A0A1W2PRV1 198 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SUPT3HB4E1H0 165 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 MKRN2OSH3BPM6 223 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 DVL2O14641 736 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SLC25A27O95847 323 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 IGHA2P01877 340 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CRYABP02511 175 aaKnown RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 MGMTP16455 207 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ACKR3P25106 362 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 S100A2P29034 98 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CD200P41217 278 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CDX1P47902 265 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CRYBA2P53672 197 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SLC6A3Q01959 620 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ITKQ08881 620 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SNTB2Q13425 540 aaKnown RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TPBGQ13641 420 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 RBBP7Q16576 425 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 C2orf68Q2NKX9 166 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PLEKHN1Q494U1 663 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 KDELC2Q7Z4H8 507 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 TPRA1Q86W33 373 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SAMD12Q8N8I0 201 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 RNF149Q8NC42 400 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 Q8NFD4 153 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 OR4C15Q8NGM1 316 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 OR51Q1Q8NH59 317 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ESAMQ96AP7 390 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF75AQ96N20 296 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 PTGES2Q9H7Z7 377 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 C1GALT1Q9NS00 363 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 SPG21Q9NZD8 308 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 MRPS18CQ9Y3D5 142 aaKnown RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CCL15-CCL14A0A0B4J2E2 113 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 C2orf92A0A1B0GVN3 265 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 A8MWP6 167 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 M0QYT0 321 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 ZNF865P0CJ78 1059 aaPredicted RBP7.33□□□□□ -1.24
COL4A5-205ENST00000483338 IFNGR1P15260 489 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 HLA-DPA1P20036 260 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 CPT2P23786 658 aa7.33□□□□□ -1.24
COL4A5-205ENST00000483338 GABRA5P31644 462 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms