RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 RNF122Q9H9V4 155 aa12.11□□□□□ -0.47
CTDSP1-208ENST00000482272 MKS1Q9NXB0 559 aa12.11□□□□□ -0.47
CTDSP1-208ENST00000482272 PAQR5Q9NXK6 330 aaPredicted RBP12.11□□□□□ -0.47
CTDSP1-208ENST00000482272 ZNF226Q9NYT6 803 aa12.11□□□□□ -0.47
CTDSP1-208ENST00000482272 MPDZO75970 2070 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 A0A087WZY1 265 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 UQCRHLA0A096LP55 91 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 SPAG7O75391 227 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 SOX30O94993 753 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 KCNK2O95069 426 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ATE1O95260 518 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 OXSR1O95747 527 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 NGFRP08138 427 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 CD8BP10966 210 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 FCGR2AP12318 317 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 BCKDHAP12694 445 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 POU2F1P14859 743 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 EFNA1P20827 205 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 CLDN20P56880 219 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 SIRPAP78324 504 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ADAM8P78325 824 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ARL13AQ5H913 290 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 FIGNL1Q6PIW4 674 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ZCCHC23Q6ZST2 131 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ZAR1Q86SH2 424 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 GALNT10Q86SR1 603 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 MISPQ8IVT2 679 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 WDR75Q8IWA0 830 aaKnown RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 METTL25Q8N6Q8 603 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 OR4C3Q8NH37 302 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 FNDC9Q8TBE3 224 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 CHMP6Q96FZ7 201 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 WFIKKN1Q96NZ8 548 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 NPAS1Q99742 590 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ROPN1BQ9BZX4 212 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 OPN3Q9H1Y3 402 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 ROPN1Q9HAT0 212 aaPredicted RBP12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 NEUROD4Q9HD90 331 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 UBQLN4Q9NRR5 601 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 PROCRQ9UNN8 238 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 VDAC3Q9Y277 283 aa12.1□□□□□ -0.47
CTDSP1-208ENST00000482272 A0A1W2PRB8 838 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 SHISA8B8ZZ34 492 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 C16orf97H3BN30 126 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 SCDO00767 359 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 EIF1AYO14602 144 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 PIP5K1BO14986 540 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 PEX11AO75192 247 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 LYPLA1O75608 230 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 CGAP01215 116 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 NUDT17P0C025 328 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ACP2P11117 423 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 FOSL1P15407 271 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZNF17P17021 662 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 SERPINB5P36952 375 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 HPCAL1P37235 193 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 EIF1AXP47813 144 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZNF41P51814 821 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 POU6F2P78424 691 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 DUSP5Q16690 384 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 TMEM44Q2T9K0 475 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 PDSS1Q5T2R2 415 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 CPTPQ5TA50 214 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 PPP4R4Q6NUP7 873 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 MFSD12Q6NUT3 480 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZNF474Q6S9Z5 364 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 FAM214BQ7L5A3 538 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 COX18Q8N8Q8 333 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZNF610Q8N9Z0 462 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 FBXO30Q8TB52 745 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 TCP10LQ8TDR4 215 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ACTRT2Q8TDY3 377 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 JADE3Q92613 823 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZBTB8AQ96BR9 441 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 OTUB1Q96FW1 271 aaPredicted RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 C16orf58Q96GQ5 468 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 C3orf30Q96M34 536 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 STACQ99469 402 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 PRPF18Q99633 342 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 MED18Q9BUE0 208 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ZCCHC3Q9NUD5 404 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ATAD3AQ9NVI7 634 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 FBXO34Q9NWN3 711 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 GIN1Q9NXP7 522 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 ATP6V1HQ9UI12 483 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 MCTS1Q9ULC4 181 aaKnown RBP12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 TESMINQ9Y4I5 508 aa12.09□□□□□ -0.47
CTDSP1-208ENST00000482272 A0A1W2PPR1 153 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 A0A1W2PQD3 144 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 SCAMP2O15127 329 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 CTIFO43310 598 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 DIAPH2O60879 1101 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 SLU7O95391 586 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 PLGP00747 810 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 UGT2B10P36537 528 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 RAC1P63000 192 aa12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 FOXD4Q12950 439 aaPredicted RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 LSM12Q3MHD2 195 aaKnown RBP12.08□□□□□ -0.48
CTDSP1-208ENST00000482272 ATP6AP1LQ52LC2 224 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms