RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ACTL7BQ9Y614 415 aa13.88□□□□□ -0.19
CDK9-203ENST00000480353 MED12LQ86YW9 2145 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 PCNX3Q9H6A9 2034 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 TUBAL3A6NHL2 446 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 H3BNH8 94 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 ITM2AO43736 263 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 IGKV1D-16P01601 117 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 TBXA2RP21731 343 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 BGNP21810 368 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 ARRB2P32121 409 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 EMX2Q04743 252 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 SMU1Q2TAY7 513 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 GLYR1Q49A26 553 aaPredicted RBP13.87□□□□□ -0.19
CDK9-203ENST00000480353 FLYWCH1Q4VC44 716 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CCNJQ5T5M9 372 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CDC73Q6P1J9 531 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 KRTCAP2Q8N6L1 136 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CNEP1R1Q8N9A8 125 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 VPS37AQ8NEZ2 397 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 SFXN5Q8TD22 340 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 FAM222BQ8WU58 562 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CDS1Q92903 461 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 GIMAP5Q96F15 307 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 SH3YL1Q96HL8 342 aaPredicted RBP13.87□□□□□ -0.19
CDK9-203ENST00000480353 STACQ99469 402 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 SH3GL2Q99962 352 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 RBM24Q9BX46 236 aaKnown RBP13.87□□□□□ -0.19
CDK9-203ENST00000480353 PINK1Q9BXM7 581 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 POLDIP3Q9BY77 421 aaKnown RBP13.87□□□□□ -0.19
CDK9-203ENST00000480353 DPY30Q9C005 99 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 PIGMQ9H3S5 423 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 DUSP22Q9NRW4 184 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CRIM1Q9NZV1 1036 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 CLCF1Q9UBD9 225 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 ZNF337Q9Y3M9 751 aa13.87□□□□□ -0.19
CDK9-203ENST00000480353 NUP214P35658 2090 aaPredicted RBP13.87□□□□□ -0.19
CDK9-203ENST00000480353 ADGRG4Q8IZF6 3080 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 A0A087WZY1 265 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 OR2M5A3KFT3 312 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 ALG1L2C9J202 215 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 SMNDC1O75940 238 aaKnown RBP eCLIP13.86□□□□□ -0.193e-6■■□□□ 13.5
CDK9-203ENST00000480353 NUDT14O95848 222 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 ME2P23368 584 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 CPOXP36551 454 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 FBXL19-AS1Q494R0 122 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 PLXDC2Q6UX71 529 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 OR4C3Q8NH37 302 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 OR5AK3PQ8NH89 298 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 HOXB13Q92826 284 aaPredicted RBP13.86□□□□□ -0.19
CDK9-203ENST00000480353 COQ8BQ96D53 544 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 PGM2Q96G03 612 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 UCN2Q96RP3 112 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 RTN4RQ9BZR6 473 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 HOXD1Q9GZZ0 328 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 PIGUQ9H490 435 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 CXorf36Q9H7Y0 433 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 AKTIPQ9H8T0 292 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 SIRT3Q9NTG7 399 aaPredicted RBP13.86□□□□□ -0.19
CDK9-203ENST00000480353 AP4B1Q9Y6B7 739 aa13.86□□□□□ -0.19
CDK9-203ENST00000480353 GTPBP1O00178 669 aaKnown RBP13.85□□□□□ -0.19
CDK9-203ENST00000480353 NGFRP08138 427 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 MAP3K8P41279 467 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 CLDN8P56748 225 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 B3GALT5-AS1P59052 145 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 FOXF2Q12947 444 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 WDR75Q8IWA0 830 aaKnown RBP13.85□□□□□ -0.19
CDK9-203ENST00000480353 OR4A15Q8NGL6 344 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 B4GALNT2Q8NHY0 566 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 PHOSPHO1Q8TCT1 267 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 MGARPQ8TDB4 240 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 GPATCH1Q9BRR8 931 aaKnown RBP13.85□□□□□ -0.19
CDK9-203ENST00000480353 NUF2Q9BZD4 464 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 ZNF395Q9H8N7 513 aaPredicted RBP13.85□□□□□ -0.19
CDK9-203ENST00000480353 GIN1Q9NXP7 522 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 NKIRAS1Q9NYS0 192 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 PACSIN3Q9UKS6 424 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 DCHS2Q6V1P9 2916 aa13.85□□□□□ -0.19
CDK9-203ENST00000480353 IGLV3-32A0A0A0MS00 114 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 EIF1AYO14602 144 aaKnown RBP13.84□□□□□ -0.19
CDK9-203ENST00000480353 CASKO14936 926 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 HCRTR2O43614 444 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 TNFRSF21O75509 655 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 SYNGR4O95473 234 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 TGM6O95932 706 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 PLGP00747 810 aaPredicted RBP13.84□□□□□ -0.19
CDK9-203ENST00000480353 CRHP06850 196 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 FCGR2AP12318 317 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 ZNF17P17021 662 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 LBPP18428 481 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 EIF1AXP47813 144 aaKnown RBP13.84□□□□□ -0.19
CDK9-203ENST00000480353 KCNJ5P48544 419 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 SIRPAP78324 504 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 SORDQ00796 357 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 DCST2Q5T1A1 773 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 PDSS1Q5T2R2 415 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 OR4F3Q6IEY1 312 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 APOOLQ6UXV4 268 aa13.84□□□□□ -0.19
CDK9-203ENST00000480353 ADGRE4PQ86SQ3 457 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms