RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SPACA9Q96E40 222 aaPredicted RBP5.9□□□□□ -1.47
HERC4-210ENST00000480158 SH3YL1Q96HL8 342 aaPredicted RBP5.9□□□□□ -1.47
HERC4-210ENST00000480158 ZNF354BQ96LW1 612 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 NODALQ96S42 347 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 WFDC6Q9BQY6 131 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 SPATA9Q9BWV2 254 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 SRA1Q9HD15 236 aaKnown RBP5.9□□□□□ -1.47
HERC4-210ENST00000480158 KLHL1Q9NR64 748 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 HPF1Q9NWY4 346 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 KLRF1Q9NZS2 232 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 CALML5Q9NZT1 146 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 ACTR3BQ9P1U1 418 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 CSAG2Q9Y5P2 127 aa5.9□□□□□ -1.47
HERC4-210ENST00000480158 PRRC2CQ9Y520 2896 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CFAP73A6NFT4 308 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 AGAP5A6NIR3 686 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 K7ENP7 123 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 SCDO00767 359 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TO15178 435 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 SUV39H1O43463 412 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 HS6ST1O60243 411 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 KIAA0513O60268 411 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TSPAN2O60636 221 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 SERPINB7O75635 380 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 MFN2O95140 757 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 OXSR1O95747 527 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 AK1P00568 194 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 UBTFL6P0CB48 400 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 GKN3PP0CG01 181 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TCEA1P23193 301 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 RYKP34925 604 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CD96P40200 585 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 YAP1P46937 504 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CYB561P49447 251 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PCBP3P57721 371 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 TMPRSS3P57727 454 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CCNIQ14094 377 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CD226Q15762 336 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 H3F3CQ6NXT2 135 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 JMJD6Q6NYC1 403 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 INO80CQ6PI98 192 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 OPN5Q6U736 354 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PATL1Q86TB9 770 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CYP4Z2PQ8N1L4 340 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CATSPER1Q8NEC5 780 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 BBS10Q8TAM1 723 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PHOSPHO1Q8TCT1 267 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 GRHL3Q8TE85 626 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 APOBEC4Q8WW27 367 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 PYDC1Q8WXC3 89 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 RELTQ969Z4 430 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 RSRC1Q96IZ7 334 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 HSH2DQ96JZ2 352 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 JSRP1Q96MG2 331 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 SIGLEC12Q96PQ1 595 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 HES7Q9BYE0 225 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TBL1XR1Q9BZK7 514 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ZNF552Q9H707 407 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 METTL7AQ9H8H3 244 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CACYBPQ9HB71 228 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CTPS2Q9NRF8 586 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 UBQLN4Q9NRR5 601 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 DCAF13Q9NV06 445 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 ADPRHL2Q9NX46 363 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 LRFN1Q9P244 771 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ZNF232Q9UNY5 417 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 GPC6Q9Y625 555 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 MED13Q9UHV7 2174 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 OR6C70A6NIJ9 312 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TTC36A6NLP5 189 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 K7EM74 188 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 hCG_2039718K7EN88 272 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 M0R3H8 397 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CDK2AP1O14519 115 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 DIRAS1O95057 198 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PABPC4LP0CB38 370 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CCL3P10147 92 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 EVI2BP34910 448 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 RFC3P40938 356 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 MAGEA8P43361 318 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TMED10P49755 219 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CCR4P51679 360 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 PNLIPRP2P54317 469 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ATP12AP54707 1039 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 AP2B1P63010 937 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ARG2P78540 354 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 TXNL4AP83876 142 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 TRAP1Q12931 704 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.89□□□□□ -1.47
HERC4-210ENST00000480158 C11orf91Q3C1V1 193 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ZNF791Q3KP31 576 aaPredicted RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 SPATS1Q496A3 300 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 CRB2Q5IJ48 1285 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 MRPL2Q5T653 305 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 C19orf48Q6RUI8 117 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ISLR2Q6UXK2 745 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 ZNF836Q6ZNA1 936 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 RBM45Q8IUH3 476 aaKnown RBP5.89□□□□□ -1.47
HERC4-210ENST00000480158 TMCO5AQ8N6Q1 288 aa5.89□□□□□ -1.47
HERC4-210ENST00000480158 GPR32P1Q8NGA4 272 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms