RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	GLYR1	Q49A26	553 aa	Predicted RBP	13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	CAMKMT	Q7Z624	323 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	COX18	Q8N8Q8	333 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	GATS	Q8NAP1	163 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	PPP1R14C	Q8TAE6	165 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	FAM222B	Q8WU58	562 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	FIG4	Q92562	907 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	JADE3	Q92613	823 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	CDS1	Q92903	461 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	PPP1R36	Q96LQ0	422 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	STAC	Q99469	402 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	GPATCH1	Q9BRR8	931 aa	Known RBP	13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	BTBD2	Q9BX70	525 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	BHLHE41	Q9C0J9	482 aa	Predicted RBP	13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	DUSP22	Q9NRW4	184 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	GIN1	Q9NXP7	522 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	HAO1	Q9UJM8	370 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	SNX8	Q9Y5X2	465 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	KCNE3	Q9Y6H6	103 aa		13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	ZNF469	Q96JG9	3925 aa	Predicted RBP	13.55	□□□□□ -0.24
CCNL1-222	ENST00000479596	MED12L	Q86YW9	2145 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	SLC22A20	A6NK97	555 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596		A6NNC1	897 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	ESPN	B1AK53	854 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596		H3BML4	177 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	LINC01387	J3KSC0	135 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	SEC14L5	O43304	696 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	NDUFB5	O43674	189 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	PRPS1L1	P21108	318 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	BGN	P21810	368 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	LCN1	P31025	176 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	CCT3	P49368	545 aa	Known RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	PRIM2	P49643	509 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	CLDN8	P56748	225 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	POU6F2	P78424	691 aa	Predicted RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	SORD	Q00796	357 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	TP53BP2	Q13625	1128 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	SMU1	Q2TAY7	513 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	CDC73	Q6P1J9	531 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	LUZP2	Q86TE4	346 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	GGN	Q86UU5	652 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	MEIOB	Q8N635	442 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	METTL25	Q8N6Q8	603 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	OR56A1	Q8NGH5	318 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	GOT1L1	Q8NHS2	421 aa	Predicted RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	LINC01560	Q8TB33	94 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	LRRC46	Q96FV0	321 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	PGM2	Q96G03	612 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	ZNF845	Q96IR2	970 aa	Predicted RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	PIGQ	Q9BRB3	760 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	DUSP26	Q9BV47	211 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	RBM24	Q9BX46	236 aa	Known RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	ACBD3	Q9H3P7	528 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	PIGU	Q9H490	435 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	AKTIP	Q9H8T0	292 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	UBQLN4	Q9NRR5	601 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	RASSF1	Q9NS23	344 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	ATAD3A	Q9NVI7	634 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	DNAJB12	Q9NXW2	375 aa	Known RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	GALNT8	Q9NY28	637 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	EIF3L	Q9Y262	564 aa	Known RBP	13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	RAP2C	Q9Y3L5	183 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596	ACTL7B	Q9Y614	415 aa		13.54	□□□□□ -0.24
CCNL1-222	ENST00000479596		A0A1W2PQD3	144 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	TUBAL3	A6NHL2	446 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	TNFRSF21	O75509	655 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	ZNF17	P17021	662 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	PSMA4	P25789	261 aa	Known RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	DNAJA1	P31689	397 aa	Known RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	SLC1A6	P48664	564 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	HBA1	P69905	142 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	MAD2L1	Q13257	205 aa	Predicted RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	DAZAP2	Q15038	168 aa	Predicted RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	PLPPR5	Q32ZL2	321 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	VWA1	Q6PCB0	445 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	NATD1	Q8N6N6	113 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	SFXN5	Q8TD22	340 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	STARD4	Q96DR4	205 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	PINK1	Q9BXM7	581 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	POLDIP3	Q9BY77	421 aa	Known RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	ACTRT3	Q9BYD9	372 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	CLEC4M	Q9H2X3	399 aa	Predicted RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	CENPH	Q9H3R5	247 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	PIGM	Q9H3S5	423 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	LIME1	Q9H400	295 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	SERHL2	Q9H4I8	314 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	NEUROD4	Q9HD90	331 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	MED17	Q9NVC6	651 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	NOP53	Q9NZM5	478 aa	Known RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	PACSIN3	Q9UKS6	424 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	VDAC3	Q9Y277	283 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	AP4B1	Q9Y6B7	739 aa		13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	MAP1A	P78559	2803 aa	Predicted RBP	13.53	□□□□□ -0.24
CCNL1-222	ENST00000479596	NPIPA5	A0A0B4J1W7	369 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	C7orf72	A4D263	438 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596		A8MXE2	369 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	NPIPA7	E9PJI5	369 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	NPIPB9	F8W1W9	429 aa		13.52	□□□□□ -0.25
CCNL1-222	ENST00000479596	ANKRD28	O15084	1053 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms