RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 SLCO1B7G3V0H7 640 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 KCNH1O95259 989 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 PEPDP12955 493 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 SDC1P18827 310 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 RPL14P50914 215 aaKnown RBP12.96□□□□□ -0.33
ATG4B-218ENST00000479554 DIO3P55073 304 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 B3GALT5-AS1P59052 145 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 EEF1A1P68104 462 aaKnown RBP12.96□□□□□ -0.33
ATG4B-218ENST00000479554 BCL2A1Q16548 175 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 EEF1A1P5Q5VTE0 462 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 RNF165Q6ZSG1 346 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 Q6ZSR9 355 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 SZRD1Q7Z422 152 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 UBQLNLQ8IYU4 475 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 MEIOBQ8N635 442 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 FITM2Q8N6M3 262 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 ZNF781Q8N8C0 355 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 OR2T11Q8NH01 316 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 LINC01560Q8TB33 94 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 CIDECQ96AQ7 238 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-218ENST00000479554 PPCDCQ96CD2 204 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 ZNF764Q96H86 408 aaPredicted RBP12.96□□□□□ -0.33
ATG4B-218ENST00000479554 FCRL1Q96LA6 429 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 TSSK3Q96PN8 268 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 FOXC2Q99958 501 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 TBL1XR1Q9BZK7 514 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 PIGMQ9H3S5 423 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 GALNT8Q9NY28 637 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 MED11Q9P086 117 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 PACSIN3Q9UKS6 424 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 ITPR3Q14573 2671 aa12.96□□□□□ -0.33
ATG4B-218ENST00000479554 NF1P21359 2839 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 A0A1W2PNV4 684 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 SLC22A20A6NK97 555 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 AKAP10O43572 662 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 GOSR1O95249 250 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 UTS2O95399 124 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 TGM6O95932 706 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 CHRNGP07510 517 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 LINC00032P0C843 101 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 PRPS2P11908 318 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 DNASE1P24855 282 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 GABRA3P34903 492 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 PRKAG1P54619 331 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 VPS26BQ4G0F5 336 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 ZNF385BQ569K4 471 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 KANK2Q63ZY3 851 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 HOMEZQ8IX15 550 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 DDIASQ8IXT1 998 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 CLHC1Q8NHS4 586 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 GPR151Q8TDV0 419 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 DUSP19Q8WTR2 217 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 STON2Q8WXE9 905 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 ZBED6CLQ96FA7 236 aaPredicted RBP12.95□□□□□ -0.34
ATG4B-218ENST00000479554 YIPF4Q9BSR8 244 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 TUBB1Q9H4B7 451 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 SH3BP4Q9P0V3 963 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 PLEKHA6Q9Y2H5 1048 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 TMED5Q9Y3A6 229 aa12.95□□□□□ -0.34
ATG4B-218ENST00000479554 LINC01387J3KSC0 135 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 ZNF195O14628 629 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 LSM1O15116 133 aaKnown RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 HDAC3O15379 428 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 SEC14L5O43304 696 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 TBX19O60806 448 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CCDC22O60826 627 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 UBOX5O94941 541 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CPOXP36551 454 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 ASMTP46597 345 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 MANFP55145 182 aaKnown RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 EEFSECP57772 596 aaKnown RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 PDE7AQ13946 482 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 RFTN2Q52LD8 501 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 OR2A2Q6IF42 318 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 PAMR1Q6UXH9 720 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 MTDHQ86UE4 582 aaKnown RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CDRT4Q8N9R6 151 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CHDHQ8NE62 594 aaPredicted RBP12.94□□□□□ -0.34
ATG4B-218ENST00000479554 NUP43Q8NFH3 380 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CEP70Q8NHQ1 597 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 TWIST2Q8WVJ9 160 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 PIK3R3Q92569 461 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 SLC9A6Q92581 669 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 C1GALT1C1Q96EU7 318 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 MS4A4EQ96PG1 132 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 PIGQQ9BRB3 760 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 MYLK2Q9H1R3 596 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 CXXC4Q9H2H0 198 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 ZDHHC2Q9UIJ5 367 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 DNAJC15Q9Y5T4 150 aa12.94□□□□□ -0.34
ATG4B-218ENST00000479554 MED13LQ71F56 2210 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 VPS13CQ709C8 3753 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 OR2M5A3KFT3 312 aa12.93□□□□□ -0.34
ATG4B-218ENST00000479554 SH3D21A4FU49 640 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms