RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 ELOA3Q8NG57 546 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 RNF128Q8TEB7 428 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 ROBO4Q8WZ75 1007 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 GPR78Q96P69 363 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 BBS4Q96RK4 519 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 CACNG6Q9BXT2 260 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 DPH5Q9H2P9 285 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 C3orf14Q9HBI5 128 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 DDX18Q9NVP1 670 aaKnown RBP14.31□□□□□ -0.12
DDX56-210ENST00000479440 KLHL13Q9P2N7 655 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 B3GALT5Q9Y2C3 310 aa14.31□□□□□ -0.12
DDX56-210ENST00000479440 KCNH1O95259 989 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 RPS17P08708 135 aaKnown RBP14.3□□□□□ -0.12
DDX56-210ENST00000479440 RBP1P09455 135 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 HNF1AP20823 631 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 PAFAH1B1P43034 410 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 GSTM5P46439 218 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 P2RY6Q15077 328 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 SPIN4Q56A73 249 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 TCHHL1Q5QJ38 904 aaPredicted RBP14.3□□□□□ -0.12
DDX56-210ENST00000479440 LETMD1Q6P1Q0 360 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 TMEM107Q6UX40 140 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 BHLHA15Q7RTS1 189 aaPredicted RBP14.3□□□□□ -0.12
DDX56-210ENST00000479440 ATG4DQ86TL0 474 aaPredicted RBP14.3□□□□□ -0.12
DDX56-210ENST00000479440 CPNE4Q96A23 557 aaPredicted RBP14.3□□□□□ -0.12
DDX56-210ENST00000479440 KLHL15Q96M94 604 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 RNF145Q96MT1 663 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 HBEGFQ99075 208 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 VPS11Q9H270 941 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 L2HGDHQ9H9P8 463 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 GP6Q9HCN6 339 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 TIGARQ9NQ88 270 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 KCNS2Q9ULS6 477 aa14.3□□□□□ -0.12
DDX56-210ENST00000479440 DPRXA6NFQ7 191 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 SHISA9B4DS77 424 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 ZSCAN12O43309 604 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 NDUFB5O43674 189 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 LMX1BO60663 402 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 ADAP00813 363 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 CSF3P09919 207 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 IGHV4-31P0DP07 118 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 TYK2P29597 1187 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 NCBP2P52298 156 aaKnown RBP eCLIP14.29□□□□□ -0.12
DDX56-210ENST00000479440 C21orf58P58505 322 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 ITGADQ13349 1161 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 STK11Q15831 433 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 PLPPR5Q32ZL2 321 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 CREG2Q8IUH2 290 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 ABHD3Q8WU67 409 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 SLC9A6Q92581 669 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 RADILQ96JH8 1075 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 TMEM185BQ9H7F4 350 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 MANSC1Q9H8J5 431 aa14.29□□□□□ -0.12
DDX56-210ENST00000479440 C19orf53Q9UNZ5 99 aaPredicted RBP14.29□□□□□ -0.12
DDX56-210ENST00000479440 A0A0J9YW62 118 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 A0A1W2PRB8 838 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 FAM187AA6NFU0 413 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 TTC36A6NLP5 189 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 ABCD4O14678 606 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 RAMP1O60894 148 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 PSMG1O95456 288 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 KRT6AP02538 564 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 OPN1LWP04000 364 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 KRT6BP04259 564 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 NTSP30990 170 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 KRT6CP48668 564 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 GZMKP49863 264 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 CARD18P57730 90 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 IRX1P78414 480 aaPredicted RBP14.28□□□□□ -0.12
DDX56-210ENST00000479440 ACSM2AQ08AH3 577 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 PPA1Q15181 289 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 RAB35Q15286 201 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 GRAMD1BQ3KR37 738 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 LIPNQ5VXI9 398 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 ACSM2BQ68CK6 577 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 NUFIP2Q7Z417 695 aaKnown RBP14.28□□□□□ -0.12
DDX56-210ENST00000479440 TRABD2AQ86V40 505 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 OR2L13Q8N349 312 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 ZNF483Q8TF39 744 aaPredicted RBP14.28□□□□□ -0.12
DDX56-210ENST00000479440 FAM168AQ92567 244 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 OSTF1Q92882 214 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 MUCL1Q96DR8 90 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 LMF2Q9BU23 707 aaKnown RBP14.28□□□□□ -0.12
DDX56-210ENST00000479440 CBLN4Q9NTU7 201 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 MED17Q9NVC6 651 aa14.28□□□□□ -0.12
DDX56-210ENST00000479440 ALG1L2C9J202 215 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 UPK1AO00322 258 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 JUNP05412 331 aaKnown RBP14.27□□□□□ -0.13
DDX56-210ENST00000479440 PGRP06401 933 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 DDCP20711 480 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 IGFBP5P24593 272 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 PSMA4P25789 261 aaKnown RBP14.27□□□□□ -0.13
DDX56-210ENST00000479440 ELK4P28324 431 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 TIA1P31483 386 aaKnown RBP eCLIP14.27□□□□□ -0.13
DDX56-210ENST00000479440 SRSF2Q01130 221 aaKnown RBP14.27□□□□□ -0.13
DDX56-210ENST00000479440 UAP1Q16222 522 aaPredicted RBP14.27□□□□□ -0.13
DDX56-210ENST00000479440 TSNAXIP1Q2TAA8 658 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 CPTPQ5TA50 214 aa14.27□□□□□ -0.13
DDX56-210ENST00000479440 C11orf71Q6IPW1 123 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms