RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 ERRFI1Q9UJM3 462 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 ACAD8Q9UKU7 415 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 MKLN1Q9UL63 735 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 RPH3AQ9Y2J0 694 aaPredicted RBP6.28□□□□□ -1.4
BRCA1-215ENST00000478531 SLC6A5Q9Y345 797 aa6.28□□□□□ -1.4
BRCA1-215ENST00000478531 A0A096LPI6 279 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 A0A1W2PP18 115 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 B4DXG7 233 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ALG1L2C9J202 215 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 PRRG2O14669 202 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 SUSD5O60279 629 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 FCMRO60667 390 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 TNFRSF21O75509 655 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 STX11O75558 287 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 CBR3O75828 277 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 H6PDO95479 791 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 AGR2O95994 175 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 AK1P00568 194 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 IGHG3P01860 377 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 STSP08842 583 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ETFAP13804 333 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ENDOUP21128 410 aaKnown RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 TBXA2RP21731 343 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 DPP4P27487 766 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ANXA11P50995 505 aaKnown RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 CD226Q15762 336 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 SYPL1Q16563 259 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ARHGAP11BQ3KRB8 267 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 PDZK1Q5T2W1 519 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 METTL21CQ5VZV1 264 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 CPLX4Q7Z7G2 160 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 DHDDSQ86SQ9 333 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 IFNEQ86WN2 208 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 FAM26EQ8N5C1 309 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 CHDHQ8NE62 594 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 NEIL3Q8TAT5 605 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 PHOSPHO1Q8TCT1 267 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ROPN1LQ96C74 230 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 SDF2Q99470 211 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ELAC2Q9BQ52 826 aaKnown RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 NMUR2Q9GZQ4 415 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 QRSL1Q9H0R6 528 aaKnown RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 SDHAF3Q9NRP4 125 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 PNPLA3Q9NST1 481 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 QPCTLQ9NXS2 382 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ALKBH4Q9NXW9 302 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 TAS2R10Q9NYW0 307 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 ARMCX1Q9P291 453 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 LEF1Q9UJU2 399 aaPredicted RBP6.27□□□□□ -1.4
BRCA1-215ENST00000478531 VDAC3Q9Y277 283 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 SLC5A6Q9Y289 635 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 WDR45Q9Y484 360 aa6.27□□□□□ -1.4
BRCA1-215ENST00000478531 KIAA1549Q9HCM3 1950 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CENPVL1A0A0U1RR11 272 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CLIC1O00299 241 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CCL21O00585 134 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 AQP7O14520 342 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ADAM10O14672 748 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 HCRTR2O43614 444 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 KIAA0513O60268 411 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 HCN1O60741 890 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SOX30O94993 753 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NUDT14O95848 222 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 HPNP05981 417 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 BCHEP06276 602 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NGFRP08138 427 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SNRPB2P08579 225 aaKnown RBP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ZCCHC18P0CG32 403 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NR2F1P10589 423 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ESRRAP11474 423 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 LCN1P31025 176 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CA7P43166 264 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 CCR4P51679 360 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 DSTNP60981 165 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SRSF1Q07955 248 aaKnown RBP eCLIP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 C17orf67Q0P5P2 114 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NDUFAF6Q330K2 333 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 C4orf17Q53FE4 359 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 DCST1Q5T197 706 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 RAET1LQ5VY80 246 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 HEPHL1Q6MZM0 1159 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF585AQ6P3V2 769 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 FRRS1Q6ZNA5 592 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NCCRP1Q6ZVX7 275 aaPredicted RBP6.27□□□□□ -1.41
BRCA1-215ENST00000478531 MSRB3Q8IXL7 192 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ANKFN1Q8N957 763 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 OR2M3Q8NG83 312 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 OR5M1Q8NGP8 315 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 FAM57AQ8TBR7 257 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 PMM1Q92871 262 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SARAFQ96BY9 339 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 NTNG2Q96CW9 530 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 DTNBP1Q96EV8 351 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 SFXN2Q96NB2 322 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 TRIM8Q9BZR9 551 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ZNF350Q9GZX5 532 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 PTGES2Q9H7Z7 377 aa6.27□□□□□ -1.41
BRCA1-215ENST00000478531 ACKR4Q9NPB9 350 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms