RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 U2AF1L4Q8WU68 220 aaKnown RBP3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 DNAJA4Q8WW22 397 aaPredicted RBP3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 NCLNQ969V3 563 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 MRPL53Q96EL3 112 aaKnown RBP3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 C19orf60Q96EN9 201 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 NPY6RQ99463 290 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 PAIP2Q9BPZ3 127 aaKnown RBP3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 APOL2Q9BQE5 337 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 COG4Q9H9E3 785 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 APMAPQ9HDC9 416 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 ONECUT1Q9UBC0 465 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 SEC14L4Q9UDX3 406 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 DIMT1Q9UNQ2 313 aaKnown RBP3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 COMMD3-BMI1R4GMX3 469 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 ABCA7Q8IZY2 2146 aa3.04□□□□□ -1.92
SMARCA1-204ENST00000478420 CUX2O14529 1486 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RAD54L2Q9Y4B4 1467 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ZMYM6O95789 1325 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 A0A1B0GTQ1 180 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ARHGEF35A5YM69 484 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 NDUFS8O00217 210 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 EEF2KO00418 725 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CHEK1O14757 476 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 TM7SF2O76062 418 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 OTCP00480 354 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 GOT2P00505 430 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CSF2P04141 144 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 FCER2P06734 321 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 GNSP15586 552 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CPN2P22792 545 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 FCARP24071 287 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 DPP4P27487 766 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 GRIA1P42261 906 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 MAGEA1P43355 309 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ACADSBP45954 432 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CDKN1BP46527 198 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 SLC11A1P49279 550 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 FNTAP49354 379 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ACADVLP49748 655 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 NLRP11P59045 1033 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RPL23AP62750 156 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 IRX3P78415 501 aaPredicted RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CRMP1Q14194 572 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 SELPLGQ14242 412 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 SYCP1Q15431 976 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 TRIP10Q15642 601 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CNPY1Q3B7I2 92 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 LRIT3Q3SXY7 679 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 AGKQ53H12 422 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 NKAIN2Q5VXU1 208 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 TTC23Q5W5X9 447 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 WDR25Q64LD2 544 aaPredicted RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CDC42EP5Q6NZY7 148 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 LHFPL4Q7Z7J7 247 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CDR2LQ86X02 465 aaPredicted RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 UBQLNLQ8IYU4 475 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 OFCC1Q8IZS5 231 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 LINC00518Q8N0U6 118 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RELL2Q8NC24 303 aaPredicted RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 FLVCR1-AS1Q8TAF5 88 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RDH11Q8TC12 318 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 SLC22A8Q8TCC7 542 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 EMG1Q92979 244 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 GAL3ST1Q99999 423 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CBWD1Q9BRT8 395 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 GLT8D2Q9H1C3 349 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 HAUS4Q9H6D7 363 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 Q9HAA7 133 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 IL1RL2Q9HB29 575 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ABCC13Q9NSE7 274 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CUTCQ9NTM9 273 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 TAS2R16Q9NYV7 291 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 SPATA7Q9P0W8 599 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ERVK-18Q9QC07 812 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 CIDEBQ9UHD4 219 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 NARFQ9UHQ1 456 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 ZNF107Q9UII5 783 aaPredicted RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 B9D1Q9UPM9 204 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RNF115Q9Y4L5 304 aa3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.03□□□□□ -1.92
SMARCA1-204ENST00000478420 RALGAPA1Q6GYQ0 2036 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 AFF2P51816 1311 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 KIF7Q2M1P5 1343 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 OR2AG2A6NM03 316 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ZNF487B1APH4 448 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 WASH3PC4AMC7 463 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SPECC1L-ADORA2AF8WAN1 911 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 FOXE1O00358 373 aaPredicted RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 ALOX15BO15296 676 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 NVLO15381 856 aaKnown RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 FCMRO60667 390 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SDC3O75056 442 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 KBTBD11O94819 623 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 VENTXO95231 258 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SYNGR4O95473 234 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 OR8G3PP0DMU2 310 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 SLC2A3P11169 496 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 PCMT1P22061 227 aa3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 CEBPDP49716 269 aaPredicted RBP3.02□□□□□ -1.93
SMARCA1-204ENST00000478420 AP3M2P53677 418 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms