RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 ESRP2Q9H6T0 727 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 DDX18Q9NVP1 670 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 VDAC3Q9Y277 283 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 STK38LQ9Y2H1 464 aa8.62□□□□□ -1.03
CCM2-210ENST00000478169 WBP11Q9Y2W2 641 aaKnown RBP8.62□□□□□ -1.03
CCM2-210ENST00000478169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.62□□□□□ -1.032e-7■■■□□ 15.8
CCM2-210ENST00000478169 SHISA8B8ZZ34 492 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ALG1L2C9J202 215 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 CXCL13O43927 109 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 GCM2O75603 506 aaPredicted RBP8.61□□□□□ -1.03
CCM2-210ENST00000478169 KCNH1O95259 989 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ENO1P06733 434 aaKnown RBP8.61□□□□□ -1.03
CCM2-210ENST00000478169 FESP07332 822 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 CD3EP07766 207 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 THBS1P07996 1170 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 NGFRP08138 427 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 SOD3P08294 240 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 AGTR1P30556 359 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 NTSP30990 170 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 GABRA3P34903 492 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 RFX3P48380 749 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ZNF844Q08AG5 666 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 C2orf80Q0P641 193 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 CHRFAM7AQ494W8 412 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 UNC50Q53HI1 259 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ZNF678Q5SXM1 525 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 FAM219BQ5XKK7 198 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 MFSD12Q6NUT3 480 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 APOOLQ6UXV4 268 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 DNM1P46Q6ZS02 220 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 GALNT10Q86SR1 603 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 OR2V1Q8NHB1 315 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCM2-210ENST00000478169 ACTRT2Q8TDY3 377 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 HSD17B8Q92506 261 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 S100PBPQ96BU1 408 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ELP4Q96EB1 424 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ZBED6CLQ96FA7 236 aaPredicted RBP8.61□□□□□ -1.03
CCM2-210ENST00000478169 PAFAH2Q99487 392 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 EBPLQ9BY08 206 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 GRIP2Q9C0E4 1043 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 GLIPR2Q9H4G4 154 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 C12orf49Q9H741 205 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 LRTM1Q9HBL6 345 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 MIEF1Q9NQG6 463 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 YAE1D1Q9NRH1 226 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ZDHHC18Q9NUE0 388 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 NINJ2Q9NZG7 142 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 ZNF180Q9UJW8 692 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 LIPT1Q9Y234 373 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 NBEAL1Q6ZS30 2694 aa8.61□□□□□ -1.03
CCM2-210ENST00000478169 A0A0J9YW62 118 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 A0A1W2PP18 115 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 ESYT3A0FGR9 886 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 TRIM49D1C9J1S8 452 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 TNFSF11O14788 317 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 CLOCKO15516 846 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 NDUFB5O43674 189 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 GMFGO60234 142 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 IGHV4-39P01824 125 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 IMPDH1P20839 514 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 ME2P23368 584 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 IL32P24001 234 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 PSMA4P25789 261 aaKnown RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 ADH6P28332 368 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 ACVR1BP36896 505 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 CDKN1AP38936 164 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 ZNF41P51814 821 aaPredicted RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 PKNOX1P55347 436 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 CARD18P57730 90 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 BTKQ06187 659 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 LCP2Q13094 533 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 SLC29A2Q14542 456 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 RNPS1Q15287 305 aaKnown RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 PRSS53Q2L4Q9 553 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 PLPPR5Q32ZL2 321 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 GRAMD1BQ3KR37 738 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 ZNF672Q499Z4 452 aaPredicted RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 VPS26BQ4G0F5 336 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 TMEM201Q5SNT2 666 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 TEX35Q5T0J7 233 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 SFRP5Q5T4F7 317 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 HBMQ6B0K9 141 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 FAM71E1Q6IPT2 247 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 FIGNL1Q6PIW4 674 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 GABRG1Q8N1C3 465 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 MMGT1Q8N4V1 131 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 FAM76AQ8TAV0 307 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 GPR151Q8TDV0 419 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 SLC9A6Q92581 669 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 HOXB13Q92826 284 aaPredicted RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 OSTF1Q92882 214 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 REXO5Q96IC2 774 aaKnown RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 AMDHD1Q96NU7 426 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 TSPYL1Q9H0U9 437 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 BARX1Q9HBU1 254 aaPredicted RBP8.6□□□□□ -1.03
CCM2-210ENST00000478169 GP6Q9HCN6 339 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 MYNNQ9NPC7 610 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 FBXO34Q9NWN3 711 aa8.6□□□□□ -1.03
CCM2-210ENST00000478169 MAGED1Q9Y5V3 778 aaPredicted RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms