RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PSPHP78330 225 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 PHC1P78364 1004 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 MRPS35P82673 323 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 DUSP2Q05923 314 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 STX5Q13190 355 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CUL3Q13618 768 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 DDX39BQ13838 428 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF460Q14592 562 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CRYMQ14894 314 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF239Q16600 458 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 HBMQ6B0K9 141 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 SULT1C3Q6IMI6 304 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 KLHL17Q6TDP4 642 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 THSD4Q6ZMP0 1018 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 GLCCI1Q86VQ1 547 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CTAGE4Q8IX94 777 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 GTPBP8Q8N3Z3 284 aaPredicted RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 TMEM186Q96B77 213 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 FBXO17Q96EF6 278 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 VSTM2LQ96N03 204 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ANKRA2Q9H9E1 313 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 UNKLQ9H9P5 680 aaKnown RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 MYNNQ9NPC7 610 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 FLRT3Q9NZU0 649 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 PRSS50Q9UI38 385 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ING1Q9UK53 422 aaPredicted RBP6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 ABCG2Q9UNQ0 655 aa6.41□□□□□ -1.38
SPTLC1-205ENST00000477888 CCNT2O60583 730 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PRKD3O94806 890 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SNUPNO95149 360 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SLU7O95391 586 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 MBD3O95983 291 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 AVPP01185 164 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PGAM1P18669 254 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 CSNK2A2P19784 350 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PGCP20142 388 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 KRT20P35900 424 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 VPS41P49754 854 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 GPX6P59796 221 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 MRPS22P82650 360 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 RIN1Q13671 783 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 ACAP2Q15057 778 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 TRIP10Q15642 601 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 ARL13AQ5H913 290 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 CPTPQ5TA50 214 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SEL1L2Q5TEA6 688 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 GRHL2Q6ISB3 625 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SLC48A1Q6P1K1 146 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SHQ1Q6PI26 577 aaKnown RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 MARCH3Q86UD3 253 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 NUDT13Q86X67 352 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 CCDC116Q8IYX3 515 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SPATA6LQ8N4H0 392 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF433Q8N7K0 673 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PDPRQ8NCN5 879 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 OR52N5Q8NH56 324 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 CNRIP1Q96F85 164 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 ZNF681Q96N22 645 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 GBP4Q96PP9 640 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 VRK1Q99986 396 aaPredicted RBP6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SUCNR1Q9BXA5 334 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SRXN1Q9BYN0 137 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 CD244Q9BZW8 370 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 SLITRK2Q9H156 845 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 BCO1Q9HAY6 547 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PLAC1Q9HBJ0 212 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 VDAC3Q9Y277 283 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 PCDHA9Q9Y5H5 950 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 ATP23Q9Y6H3 246 aa6.4□□□□□ -1.38
SPTLC1-205ENST00000477888 A0A1W2PR80 420 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 C7orf72A4D263 438 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 A6NHS1 94 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 GOLGA6L10A6NI86 522 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 H0YIV9 168 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 M0R1B8 84 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CBFA2T2O43439 604 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 BCAS2O75934 225 aaPredicted RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 WISP3O95389 354 aaPredicted RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CLDN9O95484 217 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 TTC4O95801 387 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 MSMBP08118 114 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 DAOP14920 347 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 SHC1P29353 583 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 SERPINF1P36955 418 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 KHKP50053 298 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 MANFP55145 182 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 TAS2R39P59534 338 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 PSG6Q00889 435 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CHRNEQ04844 493 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 C17orf67Q0P5P2 114 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CSTF3Q12996 717 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CCNIQ14094 377 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 OR4D1Q15615 310 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 LTB4RQ15722 352 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF628Q5EBL2 1059 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 PDSS1Q5T2R2 415 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 FAM180BQ6P0A1 224 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 APOOLQ6UXV4 268 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 FCRLAQ7L513 359 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 LRRC70Q7Z2Q7 622 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms