RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 STX16O14662 325 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 UTS2O95399 124 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PSMG1O95456 288 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 OPN1LWP04000 364 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PABPC4LP0CB38 370 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PTNP21246 168 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PSMD4P55036 377 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 CSTF3Q12996 717 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 ZNF239Q16600 458 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 TMEM201Q5SNT2 666 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PDSS1Q5T2R2 415 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 LETMD1Q6P1Q0 360 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 APOOLQ6UXV4 268 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 NUFIP2Q7Z417 695 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 ZBTB8AQ96BR9 441 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 PHF21BQ96EK2 531 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 RNF145Q96MT1 663 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 TMEM185BQ9H7F4 350 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 MRTO4Q9UKD2 239 aaKnown RBP17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 SNX6Q9UNH7 406 aa17.96■□□□□ 0.47
PDLIM1-202ENST00000477757 A0A096LPK6 155 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 GOLGA8QA0A0J9YX86 632 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 GOLGA8OA6NCC3 632 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 GOLGA8NF8WBI6 632 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 GOLGA8RI6L899 631 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 SLITRK5O94991 958 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 NTN1O95631 604 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 ADAP00813 363 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 PGRP06401 933 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 ME2P23368 584 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 STX2P32856 288 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 MPIP34949 423 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 ITGADQ13349 1161 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 RNPS1Q15287 305 aaKnown RBP17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 PLPPR5Q32ZL2 321 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 IL17RELQ6ZVW7 336 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 BHLHA15Q7RTS1 189 aaPredicted RBP17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 CCDC25Q86WR0 208 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 FAM168AQ92567 244 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 GP6Q9HCN6 339 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 VPS29Q9UBQ0 182 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 KCNS2Q9ULS6 477 aa17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 C19orf53Q9UNZ5 99 aaPredicted RBP17.95■□□□□ 0.46
PDLIM1-202ENST00000477757 MALRD1Q5VYJ5 2156 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 A0A1W2PRB8 838 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 HMX2A2RU54 273 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 ABCD4O14678 606 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 PCDH7O60245 1069 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 OTCP00480 354 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 USF1P22415 310 aaPredicted RBP17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 RFX3P48380 749 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 HEPACAMQ14CZ8 416 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 PPA1Q15181 289 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 GRAMD1BQ3KR37 738 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 FAM120AOSQ5T036 256 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 MROH9Q5TGP6 573 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 FAM166AQ6J272 317 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 C10orf105Q8TEF2 133 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 FBF1Q8TES7 1133 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 SLC9A6Q92581 669 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 PROX1Q92786 737 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 OSTF1Q92882 214 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 KLHL15Q96M94 604 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 HHATLQ9HCP6 504 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 CBLN4Q9NTU7 201 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 MED17Q9NVC6 651 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 TMCO1Q9UM00 188 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 FREM1Q5H8C1 2179 aa17.94■□□□□ 0.46
PDLIM1-202ENST00000477757 H7C417 338 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 RPS17P08708 135 aaKnown RBP17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CSF3P09919 207 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 HSD3B1P14060 373 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 HSD3B2P26439 372 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 TTKP33981 857 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 GZMKP49863 264 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CARD18P57730 90 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 RAE1P78406 368 aaKnown RBP17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CALCOCO2Q13137 446 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 ZNHIT3Q15649 155 aaPredicted RBP17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CPTPQ5TA50 214 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 LIPNQ5VXI9 398 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 FAM219BQ5XKK7 198 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 SSX8Q7RTT4 187 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 TUSC5Q8IXB3 177 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 OR2L13Q8N349 312 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CEP112Q8N8E3 955 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 ACTRT2Q8TDY3 377 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 HTRA1Q92743 480 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 REXO5Q96IC2 774 aaKnown RBP17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 RADILQ96JH8 1075 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 BBS4Q96RK4 519 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 LMF2Q9BU23 707 aaKnown RBP17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 CHODLQ9H9P2 273 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 NPAP1Q9NZP6 1156 aa17.93■□□□□ 0.46
PDLIM1-202ENST00000477757 GNG14A0A1W2PPG7 69 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 SLC35F4A4IF30 521 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 MYO1GB0I1T2 1018 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 ZNF814B7Z6K7 855 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 ALG1L2C9J202 215 aa17.92■□□□□ 0.46
PDLIM1-202ENST00000477757 CCDC188H7C350 402 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms